Literature DB >> 14871868

2LD, GENECOUNTING and HAP: Computer programs for linkage disequilibrium analysis.

Jing Hua Zhao1.   

Abstract

UNLABELLED: Computer programs are introduced which calculate pair-wise linkage disequilibrium statistics and conduct haplotype frequency estimation, including X chromosome data, and using a heuristic algorithm to handle multiple genetic markers and missing data. AVAILABILITY: Programs 2LD, GENECOUNTING and HAP are available on Internet from http://www.hgmp.mrc.ac.uk/~jzhao and http://www.iop.kcl.ac.uk/IoP/Departments/PsychMed/GEpiBSt/software.shtml

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Year:  2004        PMID： 14871868     DOI： 10.1093/bioinformatics/bth071

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  39 in total

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Authors:  Kevin R Viel; Deepa K Machiah; Diane M Warren; Manana Khachidze; Alfonso Buil; Karl Fernstrom; Juan C Souto; Juan M Peralta; Todd Smith; John Blangero; Sandra Porter; Stephen T Warren; Jordi Fontcuberta; Jose M Soria; W Dana Flanders; Laura Almasy; Tom E Howard
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3.  The DLX1and DLX2 genes and susceptibility to autism spectrum disorders.

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Journal:  Eur J Hum Genet       Date:  2008-08-27       Impact factor: 4.246

4.  BanI/D13S141/D13S175 represents a novel informative haplotype at the GJB2 gene region in the Iranian population.

Authors:  Halimeh Rezaei; Sadeq Vallian
Journal:  Cell Mol Neurobiol       Date:  2011-04-12       Impact factor: 5.046

5.  Association studies of SEPS1 gene polymorphisms with Hashimoto's thyroiditis in Han Chinese.

Authors:  Miao Li; Bailing Liu; Lu Li; Chen Zhang; Qi Zhou
Journal:  J Hum Genet       Date:  2015-05-28       Impact factor: 3.172

6.  Interaction analysis between 5-HTTLPR and TNFA -238/-308 polymorphisms in schizophrenia.

Authors:  C-U Pae; A Serretti; P Artioli; T-S Kim; J-J Kim; C-U Lee; S-J Lee; I-H Paik; C Lee
Journal:  J Neural Transm (Vienna)       Date:  2005-10-27       Impact factor: 3.575

7.  The Pro12Ala and C-681G variants of the PPARG locus are associated with opposing growth phenotypes in young schoolchildren.

Authors:  J E Cecil; B Fischer; A S F Doney; M Hetherington; P Watt; W Wrieden; C Bolton-Smith; C N A Palmer
Journal:  Diabetologia       Date:  2005-07-09       Impact factor: 10.122

8.  Influence of the inducible nitric oxide synthase gene (NOS2A) on inflammatory bowel disease susceptibility.

Authors:  M Carmen Martín; Alfonso Martinez; J Luis Mendoza; Carlos Taxonera; Manuel Díaz-Rubio; Miguel Fernández-Arquero; Emilio G de la Concha; Elena Urcelay
Journal:  Immunogenetics       Date:  2007-10-23       Impact factor: 2.846

9.  Novel IL31RA gene mutation and ancestral OSMR mutant allele in familial primary cutaneous amyloidosis.

Authors:  Ming-Wei Lin; Ding-Dar Lee; Tze-Tze Liu; Yong-Feng Lin; Shang-Yi Chen; Chih-Cheng Huang; Hui-Ying Weng; Yu-Fen Liu; Akio Tanaka; Ken Arita; Joey Lai-Cheong; Francis Palisson; Yun-Ting Chang; Chu-Kwan Wong; Isao Matsuura; John A McGrath; Shih-Feng Tsai
Journal:  Eur J Hum Genet       Date:  2010-01       Impact factor: 4.246

10.  Estrogen receptor alpha CA dinucleotide repeat polymorphism is associated with rate of bone loss in perimenopausal women and bone mineral density and risk of osteoporotic fractures in postmenopausal women.

Authors:  B M H Lai; C L Cheung; K D K Luk; A W C Kung
Journal:  Osteoporos Int       Date:  2007-09-26       Impact factor: 4.507
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