Literature DB >> 14871867

CVD: the intestinal crypt/villus in situ hybridization database.

Line Olsen1, Morten Hansen, Claus T Ekstrøm, Jesper T Troelsen, Jørgen Olsen.   

Abstract

UNLABELLED: The intestinal crypt/villus in situ hybridization database (CVD) query interface is a web-based tool to search for genes with similar relative expression patterns along the crypt/villus axis of the mammalian intestine. The CVD is an online database holding information for relative gene expression patterns in the mammalian intestine and is based on the scoring of in situ hybridization experiments reported in the literature. CVD contains expression data for 88 different genes collected from 156 different in situ hybridization profiles. The web-based query interface allows execution of both single gene queries and pattern searches. The query results provide links to the most relevant public gene databases. AVAILABILITY: http://pc113.imbg.ku.dk/ps/

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Year:  2004        PMID: 14871867     DOI: 10.1093/bioinformatics/bth072

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  2 in total

1.  Molecular characterisation of non-absorptive and absorptive enterocytes in human small intestine.

Authors:  N Gassler; D Newrzella; C Böhm; S Lyer; L Li; O Sorgenfrei; L van Laer; B Sido; J Mollenhauer; A Poustka; P Schirmacher; N Gretz
Journal:  Gut       Date:  2006-03-23       Impact factor: 23.059

2.  Changes in the transcriptional profile of transporters in the intestine along the anterior-posterior and crypt-villus axes.

Authors:  Pascale Anderle; Thierry Sengstag; David M Mutch; Martin Rumbo; Viviane Praz; Robert Mansourian; Mauro Delorenzi; Gary Williamson; Matthew-Alan Roberts
Journal:  BMC Genomics       Date:  2005-05-10       Impact factor: 3.969

  2 in total

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