Literature DB >> 14871859

CNplot: visualizing pre-clustered networks.

Nizar N Batada1.   

Abstract

SUMMARY: CNplot is a simple technique for the visualization of global connectivity within pre-clustered network data. CNplot is easy to implement and in most cases produces informative and satisfactory summary of the data. AVAILABILITY: A Java implementation is available that allows users to modify graphics parameters and produces a LaTeX output. This software is free and is available at http://csb.stanford.edu/nbatada/VCN.html

Mesh：

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Year:  2004        PMID： 14871859     DOI： 10.1093/bioinformatics/bth080

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  5 in total

1.  Information Visualization Techniques in Bioinformatics during the Postgenomic Era.

Authors:  Ying Tao; Yang Liu; Carol Friedman; Yves A Lussier
Journal:  Drug Discov Today Biosilico       Date:  2004-11

2.  Arena3D: visualization of biological networks in 3D.

Authors:  Georgios A Pavlopoulos; Seán I O'Donoghue; Venkata P Satagopam; Theodoros G Soldatos; Evangelos Pafilis; Reinhard Schneider
Journal:  BMC Syst Biol       Date:  2008-11-28

3.  The SUPERFAMILY database in 2007: families and functions.

Authors:  Derek Wilson; Martin Madera; Christine Vogel; Cyrus Chothia; Julian Gough
Journal:  Nucleic Acids Res       Date:  2006-11-10       Impact factor: 16.971

4.  POLAR MAPPER: a computational tool for integrated visualization of protein interaction networks and mRNA expression data.

Authors:  Joana P Gonçalves; Mário Grãos; André X C N Valente
Journal:  J R Soc Interface       Date:  2008-11-28       Impact factor: 4.118

5.  A survey of visualization tools for biological network analysis.

Authors:  Georgios A Pavlopoulos; Anna-Lynn Wegener; Reinhard Schneider
Journal:  BioData Min       Date:  2008-11-28       Impact factor: 2.522
  5 in total

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