Literature DB >> 1487140

Large-scale methylation patterns in the nuclear genomes of plants.

G Matassi1, R Melis, K C Kuo, G Macaya, C W Gehrke, G Bernardi.   

Abstract

Methylation was investigated in compositional fractions of nuclear DNA preparations (50-100 kb in size) from five plants (onion, maize, rye, pea and tobacco), and was found to increase from GC-poor to GC-rich fractions. This methylation gradient showed different patterns in different plants and appears, therefore, to represent a novel, characteristic genome feature which concerns the noncoding, intergenic sequences that make up the bulk of the plant genomes investigated and mainly consist of repetitive sequences. The structural and functional implications of these results are discussed.

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Year:  1992        PMID: 1487140     DOI: 10.1016/0378-1119(92)90211-7

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  7 in total

1.  Duplication-dependent CG suppression of the seed storage protein genes of maize.

Authors:  Gertrud Lund; Massimiliano Lauria; Per Guldberg; Silvio Zaina
Journal:  Genetics       Date:  2003-10       Impact factor: 4.562

2.  The distribution of genes in the genomes of Gramineae.

Authors:  A Barakat; N Carels; G Bernardi
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-24       Impact factor: 11.205

3.  The gene distribution of the maize genome.

Authors:  N Carels; A Barakat; G Bernardi
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

4.  DNA hypomethylation in 5-azacytidine-induced early-flowering lines of flax.

Authors:  M A Fieldes; S M Schaeffer; M J Krech; J C L Brown
Journal:  Theor Appl Genet       Date:  2005-04-28       Impact factor: 5.699

5.  S1 SINE retroposons are methylated at symmetrical and non-symmetrical positions in Brassica napus: identification of a preferred target site for asymmetrical methylation.

Authors:  C Goubely; P Arnaud; C Tatout; J S Heslop-Harrison; J M Deragon
Journal:  Plant Mol Biol       Date:  1999-01       Impact factor: 4.076

6.  Adenosine kinase deficiency is associated with developmental abnormalities and reduced transmethylation.

Authors:  Barbara A Moffatt; Yvonne Y Stevens; Michael S Allen; Jamie D Snider; Luiz A Pereira; Margarita I Todorova; Peter S Summers; Elizabeth A Weretilnyk; Luke Martin-McCaffrey; Conrad Wagner
Journal:  Plant Physiol       Date:  2002-03       Impact factor: 8.340

7.  Quantification bias caused by plasmid DNA conformation in quantitative real-time PCR assay.

Authors:  Chih-Hui Lin; Yu-Chieh Chen; Tzu-Ming Pan
Journal:  PLoS One       Date:  2011-12-14       Impact factor: 3.240

  7 in total

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