Literature DB >> 1483411

Application of dynamic light scattering to studies of protein folding kinetics.

K Gast1, G Damaschun, R Misselwitz, D Zirwer.   

Abstract

The applicability of dynamic light scattering to studies of the kinetics of unfolding and refolding reactions of proteins is discussed and demonstrated experimentally. The experimental set-up and the data acquisition and data evaluation schemes that have been optimized for kinetic experiments are described. The relationship of the signal-to-noise ratio to the minimum data acquisition time that is needed to obtain results of sufficiently high precision is discussed. It turns out that the attainable time resolution is of the order of a few seconds for proteins with molar masses of about 50,000 g.mol(-1) and concentrations of 1 g.1(-1). Thus, DLS is too slow to follow conformational changes in the subsecond region, but it is useful for studies of unfolding-refolding reactions of proteins that proceed with time constants in the range of seconds or minutes. This is demonstrated by investigations of the kinetics of the cold denaturation of 3-phosphoglycerate kinase from yeast.

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Year:  1992        PMID: 1483411     DOI: 10.1007/bf00188349

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  15 in total

Review 1.  Cold denaturation of proteins.

Authors:  P L Privalov
Journal:  Crit Rev Biochem Mol Biol       Date:  1990       Impact factor: 8.250

2.  Study of thermal denaturation of lysozyme and other glubular proteins by light-scattering spectroscopy.

Authors:  D F Nicoli; G B Benedek
Journal:  Biopolymers       Date:  1976-12       Impact factor: 2.505

3.  Heat and cold denaturation of phosphoglycerate kinase (interaction of domains).

Authors:  P L Privalov
Journal:  FEBS Lett       Date:  1989-02-27       Impact factor: 4.124

4.  Refolding kinetics of pig muscle and yeast 3-phosphoglycerate kinases and of their proteolytic fragments.

Authors:  G V Semisotnov; M Vas; V V Chemeris; N J Kashparova; N V Kotova; O I Razgulyaev; M A Sinev
Journal:  Eur J Biochem       Date:  1991-12-18

5.  Kinetics of insulin aggregation in aqueous solutions upon agitation in the presence of hydrophobic surfaces.

Authors:  V Sluzky; J A Tamada; A M Klibanov; R Langer
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-01       Impact factor: 11.205

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  The folding and mutual interaction of the domains of yeast 3-phosphoglycerate kinase.

Authors:  B Adams; R J Burgess; R H Pain
Journal:  Eur J Biochem       Date:  1985-11-04

Review 8.  Folding and association of proteins.

Authors:  R Jaenicke
Journal:  Prog Biophys Mol Biol       Date:  1987       Impact factor: 3.667

9.  Low-temperature unfolding of a mutant of phage T4 lysozyme. 2. Kinetic investigations.

Authors:  B L Chen; W A Baase; J A Schellman
Journal:  Biochemistry       Date:  1989-01-24       Impact factor: 3.162

10.  Sequence and structure of yeast phosphoglycerate kinase.

Authors:  H C Watson; N P Walker; P J Shaw; T N Bryant; P L Wendell; L A Fothergill; R E Perkins; S C Conroy; M J Dobson; M F Tuite
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  4 in total

1.  Thermostability of endo-1,4-beta-xylanase II from Trichoderma reesei studied by electrospray ionization Fourier-transform ion cyclotron resonance MS, hydrogen/deuterium-exchange reactions and dynamic light scattering.

Authors:  J Jänis; J Rouvinen; M Leisola; O Turunen; P Vainiotalo
Journal:  Biochem J       Date:  2001-06-01       Impact factor: 3.857

2.  Lack of coupling between secondary structure formation and collapse in a model polypeptide that mimics early folding intermediates, the F2 fragment of the Escherichia coli tryptophan-synthase beta chain.

Authors:  K Gast; A F Chaffotte; D Zirwer; Y Guillou; M Mueller-Frohne; C Cadieux; M Hodges; G Damaschun; M E Goldberg
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

3.  Trifluoroethanol-induced conformational transitions of proteins: insights gained from the differences between alpha-lactalbumin and ribonuclease A.

Authors:  K Gast; D Zirwer; M Müller-Frohne; G Damaschun
Journal:  Protein Sci       Date:  1999-03       Impact factor: 6.725

4.  Compactness of protein molten globules: temperature-induced structural changes of the apomyoglobin folding intermediate.

Authors:  K Gast; H Damaschun; R Misselwitz; M Müller-Frohne; D Zirwer; G Damaschun
Journal:  Eur Biophys J       Date:  1994       Impact factor: 1.733

  4 in total

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