Literature DB >> 14769049

Folding of an abridged beta-lactamase.

Javier Santos1, Leopoldo G Gebhard, Valeria A Risso, Raul G Ferreyra, Juan P F C Rossi, Mario R Ermácora.   

Abstract

The effects of C-terminal truncation on the equilibrium folding transitions and folding kinetics of B. licheniformis exo small beta-lactamase (ES-betaL) have been measured. ES-betaL lacking 19 residues (ES-betaL(C)(Delta)(19)) has no enzymic activity. Deletion of the last 14 residues produces ES-betaL(C)(Delta)(14), which is 0.1% active. The enzyme lacking nine residues (ES-betaL(C)(Delta)(9)) is nearly fully active, has native optical and hydrodynamic properties, and is protease resistant, a distinguishing feature of the wild-type enzyme. Although ES-betaL(C)(Delta)(9) folds properly, it does so 4 orders of magnitude slower than ES-betaL, making possible the isolation and characterization of a compact intermediate state (I(P) ES-betaL(C)(Delta)(9)). Based on the analysis of folding rates and equilibrium constants, we propose that equilibrium between I(P) ES-betaL(C)(Delta)(9) and other intermediate slow folding. Residues removed in ES-betaL(C)(Delta)(9) and ES-betaL(C)(Delta)(14) are helical and firmly integrated into the enzyme body through many van der Waals interactions involving residues distant in sequence. The results suggest that the deleted residues play a key role in the folding process and also the existence of a modular organization of the protein matrix, at the subdomain level. The results are compared with other examples of this kind in the folding literature.

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Year:  2004        PMID: 14769049     DOI: 10.1021/bi0358162

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Effects of serine-to-cysteine mutations on beta-lactamase folding.

Authors:  Javier Santos; Valeria A Risso; Mauricio P Sica; Mario R Ermácora
Journal:  Biophys J       Date:  2007-05-11       Impact factor: 4.033

2.  Re-engineering a beta-lactamase using prototype peptides from a library of local structural motifs.

Authors:  Valeria A Risso; María E Primo; Mario R Ermácora
Journal:  Protein Sci       Date:  2009-02       Impact factor: 6.725

3.  ICA512 RESP18 homology domain is a protein-condensing factor and insulin fibrillation inhibitor.

Authors:  Pamela L Toledo; Juha M Torkko; Andreas Müller; Carolin Wegbrod; Anke Sönmez; Michele Solimena; Mario R Ermácora
Journal:  J Biol Chem       Date:  2019-04-12       Impact factor: 5.157

4.  X-ray evidence of a native state with increased compactness populated by tryptophan-less B. licheniformis β-lactamase.

Authors:  Valeria A Risso; Juan P Acierno; Stefano Capaldi; Hugo L Monaco; Mario R Ermácora
Journal:  Protein Sci       Date:  2012-05-31       Impact factor: 6.725

5.  Equilibrium partially folded states of B. licheniformis[Formula: see text]-lactamase.

Authors:  Valeria A Risso; Mario R Ermácora
Journal:  Eur Biophys J       Date:  2019-03-30       Impact factor: 1.733

6.  Global Implications of Local Unfolding Phenomena, Probed by Cysteine Reactivity in Human Frataxin.

Authors:  Santiago E Faraj; Martín E Noguera; José María Delfino; Javier Santos
Journal:  Sci Rep       Date:  2019-02-11       Impact factor: 4.379

7.  Detecting repetitions and periodicities in proteins by tiling the structural space.

Authors:  R Gonzalo Parra; Rocío Espada; Ignacio E Sánchez; Manfred J Sippl; Diego U Ferreiro
Journal:  J Phys Chem B       Date:  2013-07-05       Impact factor: 2.991

  7 in total

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