Literature DB >> 14763754

Determination of average degree of polymerisation and distribution of oligosaccharides in a partially acid-hydrolysed homopolysaccharide: a comparison of four experimental methods applied to mannuronan.

Cristiana Campa1, Astrid Oust, Gudmund Skjåk-Braek, Berit Smestad Paulsen, Sergio Paoletti, Bjørn E Christensen, Simon Ballance.   

Abstract

The average degree of polymerisation (DP) and distribution of oligosaccharides in partially acid hydrolysed mannuronans were quantitatively evaluated by 1H NMR, electrospray ionisation mass spectrometry (ESI-MS), micellar electrokinetic capillary chromatography with UV detection (MEKC-UV), and high-pressure anion-exchange chromatography with pulsed amperometric detection (HPAEC-PAD). Our investigation shows that 1H NMR, MEKC-UV and, in particular, HPAEC-PAD can be used as quantitative tools to aid the investigation of polysaccharide structure, function and synthesis. For the latter two techniques, especially, this represents a significant new development as it enables calculation of the quantity of individual oligomers of nominal DP by direct analysis of a defined oligomer mixture. Appropriate statistical averages of number and weight distributions were also calculated and found to fit very well to predicted Kuhn distributions that assume random depolymerisation.

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Year:  2004        PMID: 14763754     DOI: 10.1016/j.chroma.2003.11.045

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN: 0021-9673            Impact factor:   4.759


  7 in total

1.  Mode of action and subsite studies of the guluronan block-forming mannuronan C-5 epimerases AlgE1 and AlgE6.

Authors:  Synnøve Holtan; Per Bruheim; Gudmund Skjåk-Braek
Journal:  Biochem J       Date:  2006-04-15       Impact factor: 3.857

2.  Structural and functional characterization of the R-modules in alginate C-5 epimerases AlgE4 and AlgE6 from Azotobacter vinelandii.

Authors:  Edith Buchinger; Daniel H Knudsen; Manja A Behrens; Jan Skov Pedersen; Olav A Aarstad; Anne Tøndervik; Svein Valla; Gudmund Skjåk-Bræk; Reinhard Wimmer; Finn L Aachmann
Journal:  J Biol Chem       Date:  2014-09-29       Impact factor: 5.157

3.  Isolation of mutant alginate lyases with cleavage specificity for di-guluronic acid linkages.

Authors:  Anne Tøndervik; Geir Klinkenberg; Olav A Aarstad; Finn Drabløs; Helga Ertesvåg; Trond E Ellingsen; Gudmund Skjåk-Bræk; Svein Valla; Håvard Sletta
Journal:  J Biol Chem       Date:  2010-09-07       Impact factor: 5.157

4.  AlgX is a periplasmic protein required for alginate biosynthesis in Pseudomonas aeruginosa.

Authors:  Antonette Robles-Price; Thiang Yian Wong; Håvard Sletta; Svein Valla; Neal L Schiller
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

5.  Study of the mode of action of a polygalacturonase from the phytopathogen Burkholderia cepacia.

Authors:  Claudia Massa; Mads H Clausen; Jure Stojan; Doriano Lamba; Cristiana Campa
Journal:  Biochem J       Date:  2007-10-15       Impact factor: 3.857

6.  Biochemical analysis of the processive mechanism for epimerization of alginate by mannuronan C-5 epimerase AlgE4.

Authors:  Cristiana Campa; Synnøve Holtan; Nadra Nilsen; Tonje M Bjerkan; Bjørn T Stokke; Gudmund Skjåk-Braek
Journal:  Biochem J       Date:  2004-07-01       Impact factor: 3.857

7.  Sequence analysis of alginate-derived oligosaccharides by negative-ion electrospray tandem mass spectrometry.

Authors:  Zhenqing Zhang; Guangli Yu; Xia Zhao; Haiying Liu; Huashi Guan; Alexander M Lawson; Wengang Chai
Journal:  J Am Soc Mass Spectrom       Date:  2006-02-28       Impact factor: 3.109

  7 in total

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