Literature DB >> 14756554

Catalytic mechanism of the cyclohydrolase activity of human aminoimidazole carboxamide ribonucleotide formyltransferase/inosine monophosphate cyclohydrolase.

James M Vergis1, G Peter Beardsley.   

Abstract

The bifunctional enzyme aminoimidazole carboxamide ribonucleotide transformylase/inosine monophosphate cyclohydrolase (ATIC) is responsible for catalysis of the last two steps in the de novo purine pathway. Using recently determined crystal structures of ATIC as a guide, four candidate residues, Lys66, Tyr104, Asp125, and Lys137, were identified for site-directed mutagenesis to study the cyclohydrolase activity of this bifunctional enzyme. Steady-state kinetic experiments on these mutants have shown that none of these residues are absolutely required for catalytic activity; however, they strongly influence the efficiency of the reaction. Since the FAICAR binding site is made up mostly of backbone interactions with highly conserved residues, we postulate that these conserved interactions orient FAICAR in the active site to favor the intramolecular ring closure reaction and that this reaction may be catalyzed by an orbital steering mechanism. Furthermore, it was shown that Lys137 is responsible for the increase in cyclohydrolase activity for dimeric ATIC, which was reported previously by our laboratory. From the experiments presented here, a catalytic mechanism for the cyclohydrolase activity is postulated.

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Year:  2004        PMID: 14756554     DOI: 10.1021/bi035139b

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Structural analyses of a purine biosynthetic enzyme from Mycobacterium tuberculosis reveal a novel bound nucleotide.

Authors:  Jérôme Le Nours; Esther M M Bulloch; Zhening Zhang; David R Greenwood; Martin J Middleditch; James M J Dickson; Edward N Baker
Journal:  J Biol Chem       Date:  2011-09-28       Impact factor: 5.157

2.  A novel function for the N-terminal nucleophile hydrolase fold demonstrated by the structure of an archaeal inosine monophosphate cyclohydrolase.

Authors:  You-Na Kang; Anh Tran; Robert H White; Steven E Ealick
Journal:  Biochemistry       Date:  2007-04-04       Impact factor: 3.162

3.  Therapeutics by cytotoxic metabolite accumulation: pemetrexed causes ZMP accumulation, AMPK activation, and mammalian target of rapamycin inhibition.

Authors:  Alexandra C Racanelli; Scott B Rothbart; Cortney L Heyer; Richard G Moran
Journal:  Cancer Res       Date:  2009-06-23       Impact factor: 12.701

4.  Purine biosynthesis in archaea: variations on a theme.

Authors:  Anne M Brown; Samantha L Hoopes; Robert H White; Catherine A Sarisky
Journal:  Biol Direct       Date:  2011-12-14       Impact factor: 4.540

5.  Cyclic Peptide Mimotopes for the Detection of Serum Anti-ATIC Autoantibody Biomarker in Hepato-Cellular Carcinoma.

Authors:  Chang-Kyu Heo; Hai-Min Hwang; Won-Hee Lim; Hye-Jung Lee; Jong-Shin Yoo; Kook-Jin Lim; Eun-Wie Cho
Journal:  Int J Mol Sci       Date:  2020-12-19       Impact factor: 5.923

6.  Physiological levels of folic acid reveal purine alterations in Lesch-Nyhan disease.

Authors:  José M López; Esther L Outtrim; Rong Fu; Diane J Sutcliffe; Rosa J Torres; H A Jinnah
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-19       Impact factor: 11.205

7.  Experimental characterization of two archaeal inosine 5'-monophosphate cyclohydrolases.

Authors:  Caroline A Hunter; Nicholas I Plymale; Kevin M Smee; Catherine A Sarisky
Journal:  PLoS One       Date:  2019-10-17       Impact factor: 3.240

  7 in total

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