Literature DB >> 14755306

Finding needles in a haystack. In silico identification of eukaryotic selenoprotein genes.

Donna M Driscoll1, Laurent Chavatte.   

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Year:  2004        PMID： 14755306      PMCID： PMC1298991          DOI： 10.1038/sj.embor.7400080

Source DB:  PubMed          Journal:  EMBO Rep        ISSN： 1469-221X            Impact factor:   8.807


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  9 in total

1.  In silico identification of novel selenoproteins in the Drosophila melanogaster genome.

Authors:  S Castellano; N Morozova; M Morey; M J Berry; F Serras; M Corominas; R Guigó
Journal:  EMBO Rep       Date:  2001-08       Impact factor: 8.807

Review 2.  How selenium has altered our understanding of the genetic code.

Authors:  Dolph L Hatfield; Vadim N Gladyshev
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

3.  Reconsidering the evolution of eukaryotic selenoproteins: a novel nonmammalian family with scattered phylogenetic distribution.

Authors:  Sergi Castellano; Sergey V Novoselov; Gregory V Kryukov; Alain Lescure; Enrique Blanco; Alain Krol; Vadim N Gladyshev; Roderic Guigó
Journal:  EMBO Rep       Date:  2004-01       Impact factor: 8.807

4.  New mammalian selenocysteine-containing proteins identified with an algorithm that searches for selenocysteine insertion sequence elements.

Authors:  G V Kryukov; V M Kryukov; V N Gladyshev
Journal:  J Biol Chem       Date:  1999-11-26       Impact factor: 5.157

Review 5.  Protein factors mediating selenoprotein synthesis.

Authors:  Alain Lescure; Delphine Fagegaltier; Philippe Carbon; Alain Krol
Journal:  Curr Protein Pept Sci       Date:  2002-02       Impact factor: 3.272

6.  Novel selenoproteins identified in silico and in vivo by using a conserved RNA structural motif.

Authors:  A Lescure; D Gautheret; P Carbon; A Krol
Journal:  J Biol Chem       Date:  1999-12-31       Impact factor: 5.157

7.  Characterization of mammalian selenoproteomes.

Authors:  Gregory V Kryukov; Sergi Castellano; Sergey V Novoselov; Alexey V Lobanov; Omid Zehtab; Roderic Guigó; Vadim N Gladyshev
Journal:  Science       Date:  2003-05-30       Impact factor: 47.728

8.  Selenoproteins and selenocysteine insertion system in the model plant cell system, Chlamydomonas reinhardtii.

Authors:  Sergey V Novoselov; Mahadev Rao; Natalia V Onoshko; Huijun Zhi; Gregory V Kryukov; Youbin Xiang; Donald P Weeks; Dolph L Hatfield; Vadim N Gladyshev
Journal:  EMBO J       Date:  2002-07-15       Impact factor: 11.598

Review 9.  Mechanism and regulation of selenoprotein synthesis.

Authors:  Donna M Driscoll; Paul R Copeland
Journal:  Annu Rev Nutr       Date:  2003-01-08       Impact factor: 11.848
  9 in total
  13 in total

Review 1.  Size matters: a view of selenocysteine incorporation from the ribosome.

Authors:  K Caban; P R Copeland
Journal:  Cell Mol Life Sci       Date:  2006-01       Impact factor: 9.261

Review 2.  Understanding the importance of selenium and selenoproteins in muscle function.

Authors:  M Rederstorff; A Krol; A Lescure
Journal:  Cell Mol Life Sci       Date:  2006-01       Impact factor: 9.261

3.  Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes.

Authors:  M Mariotti; R Guigó
Journal:  Bioinformatics       Date:  2010-09-21       Impact factor: 6.937

4.  A single homozygous point mutation in a 3'untranslated region motif of selenoprotein N mRNA causes SEPN1-related myopathy.

Authors:  Valérie Allamand; Pascale Richard; Alain Lescure; Céline Ledeuil; Delphine Desjardin; Nathalie Petit; Corine Gartioux; Ana Ferreiro; Alain Krol; Nadine Pellegrini; J Andoni Urtizberea; Pascale Guicheney
Journal:  EMBO Rep       Date:  2006-02-24       Impact factor: 8.807

5.  Known turnover and translation regulatory RNA-binding proteins interact with the 3' UTR of SECIS-binding protein 2.

Authors:  Jodi L Bubenik; Andrea N Ladd; Carri A Gerber; Michael E Budiman; Donna M Driscoll
Journal:  RNA Biol       Date:  2009-01-05       Impact factor: 4.652

6.  A functional link between housekeeping selenoproteins and phase II enzymes.

Authors:  Aniruddha Sengupta; Bradley A Carlson; James A Weaver; Sergey V Novoselov; Dmitri E Fomenko; Vadim N Gladyshev; Dolph L Hatfield
Journal:  Biochem J       Date:  2008-07-01       Impact factor: 3.857

7.  RNAProfile: an algorithm for finding conserved secondary structure motifs in unaligned RNA sequences.

Authors:  Giulio Pavesi; Giancarlo Mauri; Marco Stefani; Graziano Pesole
Journal:  Nucleic Acids Res       Date:  2004-06-15       Impact factor: 16.971

8.  Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

Authors:  Madeline A Crosby; L Sian Gramates; Gilberto Dos Santos; Beverley B Matthews; Susan E St Pierre; Pinglei Zhou; Andrew J Schroeder; Kathleen Falls; David B Emmert; Susan M Russo; William M Gelbart
Journal:  G3 (Bethesda)       Date:  2015-06-24       Impact factor: 3.154

9.  Alternative transcripts and 3'UTR elements govern the incorporation of selenocysteine into selenoprotein S.

Authors:  Jodi L Bubenik; Angela C Miniard; Donna M Driscoll
Journal:  PLoS One       Date:  2013-04-16       Impact factor: 3.240

10.  SECISearch3 and Seblastian: new tools for prediction of SECIS elements and selenoproteins.

Authors:  Marco Mariotti; Alexei V Lobanov; Roderic Guigo; Vadim N Gladyshev
Journal:  Nucleic Acids Res       Date:  2013-06-19       Impact factor: 16.971
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