Literature DB >> 14752261

3D TROSY-HNCA(coded)CB and TROSY-HNCA(coded)CO experiments: triple resonance NMR experiments with two sequential connectivity pathways and high sensitivity.

Christiane Ritter1, Thorsten Lührs, Witek Kwiatkowski, Roland Riek.   

Abstract

The concept of chemical shift-coding monitors chemical shifts in multi-dimensional NMR experiments without additional polarization transfer elements and evolution periods. The chemical shifts are coded in the line-shape of the cross-peak through an apparent scalar coupling dependent upon the chemical shift. This concept is applied to the three-dimensional triple-resonance experiment HNCA adding the information of (13)C(beta) or (13)C' chemical shifts. On average, the proposed TROSY-HNCA(coded)CB experiment is a factor of 2 less sensitive than the HNCA experiment. However, it contains correlations via the chemical shifts of both (13)C(alpha) and (13)C(beta), and provides up to three times higher resolution along the (13)C(alpha) chemical shift axis. Thus, it dramatically reduces ambiguities in linking the spin systems of adjacent residues in the protein sequence during the sequential assignment. The TROSY-HNCA(coded)CO experiment which is conceptually similar contains correlations via the chemical shifts of (13)C(alpha) and (13)C' without major signal losses. The proposed triple resonance experiments are applied to a approximately 70% (2)H, approximately 85% (13)C,(15)N labeled protein with a molecular weight of 25 kDa.

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Year:  2004        PMID: 14752261     DOI: 10.1023/B:JNMR.0000013698.89582.dc

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  13 in total

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Authors:  G T Montelione; D Zheng; Y J Huang; K C Gunsalus; T Szyperski
Journal:  Nat Struct Biol       Date:  2000-11

Review 2.  Mapping protein-protein interactions in solution by NMR spectroscopy.

Authors:  Erik R P Zuiderweg
Journal:  Biochemistry       Date:  2002-01-08       Impact factor: 3.162

3.  Four-dimensional NMR spectroscopy of a 723-residue protein: chemical shift assignments and secondary structure of malate synthase g.

Authors:  Vitali Tugarinov; Ranjith Muhandiram; Ayeda Ayed; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2002-08-28       Impact factor: 15.419

4.  Chemical shift-dependent apparent scalar couplings: an alternative concept of chemical shift monitoring in multi-dimensional NMR experiments.

Authors:  Witek Kwiatkowski; Roland Riek
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

5.  A method for efficient isotopic labeling of recombinant proteins.

Authors:  J Marley; M Lu; C Bracken
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

6.  Increased sensitivity in HNCA and HN(CO)CA experiments by selective C beta decoupling.

Authors:  H Matsuo; E Kupce; H Li; G Wagner
Journal:  J Magn Reson B       Date:  1996-10

7.  Discovering high-affinity ligands for proteins: SAR by NMR.

Authors:  S B Shuker; P J Hajduk; R P Meadows; S W Fesik
Journal:  Science       Date:  1996-11-29       Impact factor: 47.728

8.  [13C]-constant-time [15N,1H]-TROSY-HNCA for sequential assignments of large proteins.

Authors:  M Salzmann; K Pervushin; G Wider; H Senn; K Wüthrich
Journal:  J Biomol NMR       Date:  1999-05       Impact factor: 2.835

9.  TROSY NMR with partially deuterated proteins.

Authors:  A Eletsky; A Kienhöfer; K Pervushin
Journal:  J Biomol NMR       Date:  2001-06       Impact factor: 2.835

10.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

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  2 in total

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Journal:  PLoS Biol       Date:  2014-08-05       Impact factor: 8.029

2.  Unambiguous Tracking of Protein Phosphorylation by Fast High-Resolution FOSY NMR*.

Authors:  Dmitry M Lesovoy; Panagiota S Georgoulia; Tammo Diercks; Irena Matečko-Burmann; Björn M Burmann; Eduard V Bocharov; Wolfgang Bermel; Vladislav Y Orekhov
Journal:  Angew Chem Int Ed Engl       Date:  2021-07-13       Impact factor: 15.336

  2 in total

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