Literature DB >> 14745573

Microarray-based gene expression profiling in pancreatic ductal carcinoma: status quo and perspectives.

Robert Grützmann1, Hans Detlev Saeger, Jutta Lüttges, Hans Konrad Schackert, Holger Kalthoff, Günter Klöppel, Christian Pilarsky.   

Abstract

BACKGROUND: Pancreatic ductal adenocarcinoma has an extremely poor prognosis. To improve the prognosis, novel molecular markers and targets for earlier diagnosis and adjuvant and/or neoadjuvant treatment need to be identified. One of the key techniques that has been developed to achieve this goal is DNA microarray profiling, which is used to identify the mechanisms of deregulated molecular functions in pancreatic carcinoma cells.
OBJECTIVE: As several studies using microarrays have already been published, this review attempts to compare published data and crossvalidate the results. In addition, the applied techniques are discussed. Copyright 2004 Springer-Verlag

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Year:  2004        PMID: 14745573     DOI: 10.1007/s00384-003-0563-3

Source DB:  PubMed          Journal:  Int J Colorectal Dis        ISSN: 0179-1958            Impact factor:   2.571


  71 in total

1.  High-fidelity mRNA amplification for gene profiling.

Authors:  E Wang; L D Miller; G A Ohnmacht; E T Liu; F M Marincola
Journal:  Nat Biotechnol       Date:  2000-04       Impact factor: 54.908

2.  Identification of disease-specific genes in chronic pancreatitis using DNA array technology.

Authors:  H Friess; J Ding; J Kleeff; Q Liao; P O Berberat; J Hammer; M W Büchler
Journal:  Ann Surg       Date:  2001-12       Impact factor: 12.969

3.  A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization.

Authors:  D Shalon; S J Smith; P O Brown
Journal:  Genome Res       Date:  1996-07       Impact factor: 9.043

4.  Global gene expression profiling in Barrett's esophagus and esophageal cancer: a comparative analysis using cDNA microarrays.

Authors:  F M Selaru; T Zou; Y Xu; V Shustova; J Yin; Y Mori; F Sato; S Wang; A Olaru; D Shibata; B D Greenwald; M J Krasna; J M Abraham; S J Meltzer
Journal:  Oncogene       Date:  2002-01-17       Impact factor: 9.867

5.  Analysis of gene expression profile of pancreatic carcinoma using cDNA microarray.

Authors:  Zhi-Jun Tan; Xian-Gui Hu; Gui-Song Cao; Yan Tang
Journal:  World J Gastroenterol       Date:  2003-04       Impact factor: 5.742

6.  Overexpression of c-Ki-ras and c-fos in human pancreatic carcinomas.

Authors:  K Wakita; H Ohyanagi; K Yamamoto; T Tokuhisa; Y Saitoh
Journal:  Int J Pancreatol       Date:  1992-02

7.  Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays.

Authors:  U Alon; N Barkai; D A Notterman; K Gish; S Ybarra; D Mack; A J Levine
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

8.  Cytoplasmic expression of laminin gamma2 chain correlates with postoperative hepatic metastasis and poor prognosis in patients with pancreatic ductal adenocarcinoma.

Authors:  Shinichiro Takahashi; Takahiro Hasebe; Tatsuya Oda; Satoshi Sasaki; Taira Kinoshita; Masaru Konishi; Takenori Ochiai; Atsushi Ochiai
Journal:  Cancer       Date:  2002-03-15       Impact factor: 6.860

9.  Expression and function of receptors for extracellular matrix proteins in human ductal adenocarcinomas of the pancreas.

Authors:  M Löhr; B Trautmann; M Göttler; S Peters; I Zauner; A Maier; G Klöppel; S Liebe; E D Kreuser
Journal:  Pancreas       Date:  1996-04       Impact factor: 3.327

10.  Exploration of global gene expression patterns in pancreatic adenocarcinoma using cDNA microarrays.

Authors:  Christine A Iacobuzio-Donahue; Anirban Maitra; Mari Olsen; Anson W Lowe; N Tjarda van Heek; Christophe Rosty; Kim Walter; Norihiro Sato; Antony Parker; Raheela Ashfaq; Elizabeth Jaffee; Byungwoo Ryu; Jessa Jones; James R Eshleman; Charles J Yeo; John L Cameron; Scott E Kern; Ralph H Hruban; Patrick O Brown; Michael Goggins
Journal:  Am J Pathol       Date:  2003-04       Impact factor: 4.307

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  10 in total

1.  Bioorthogonal labeling cell-surface proteins expressed in pancreatic cancer cells to identify potential diagnostic/therapeutic biomarkers.

Authors:  Randy S Haun; Charles M Quick; Eric R Siegel; Ilangovan Raju; Samuel G Mackintosh; Alan J Tackett
Journal:  Cancer Biol Ther       Date:  2015-07-15       Impact factor: 4.742

2.  Identification of biomarkers of human pancreatic adenocarcinomas by expression profiling and validation with gene expression analysis in endoscopic ultrasound-guided fine needle aspiration samples.

Authors:  Henrik Laurell; Michele Bouisson; Philippe Berthelemy; Philippe Rochaix; Sebastien Dejean; Philippe Besse; Christiane Susini; Lucien Pradayrol; Nicole Vaysse; Louis Buscail
Journal:  World J Gastroenterol       Date:  2006-06-07       Impact factor: 5.742

3.  Identification and validation of commonly overexpressed genes in solid tumors by comparison of microarray data.

Authors:  Christian Pilarsky; Michael Wenzig; Thomas Specht; Hans Detlev Saeger; Robert Grützmann
Journal:  Neoplasia       Date:  2004 Nov-Dec       Impact factor: 5.715

4.  Examination of apoptosis signaling in pancreatic cancer by computational signal transduction analysis.

Authors:  Felix Rückert; Gihan Dawelbait; Christof Winter; Arndt Hartmann; Axel Denz; Ole Ammerpohl; Michael Schroeder; Hans Konrad Schackert; Bence Sipos; Günter Klöppel; Holger Kalthoff; Hans-Detlev Saeger; Christian Pilarsky; Robert Grützmann
Journal:  PLoS One       Date:  2010-08-19       Impact factor: 3.240

5.  The molecular biology of pancreatic cancer.

Authors:  Michael A Abramson; Amarsanaa Jazag; Jill A van der Zee; Edward E Whang
Journal:  Gastrointest Cancer Res       Date:  2007

6.  A six-gene signature predicts survival of patients with localized pancreatic ductal adenocarcinoma.

Authors:  Jeran K Stratford; David J Bentrem; Judy M Anderson; Cheng Fan; Keith A Volmar; J S Marron; Elizabeth D Routh; Laura S Caskey; Jonathan C Samuel; Channing J Der; Leigh B Thorne; Benjamin F Calvo; Hong Jin Kim; Mark S Talamonti; Christine A Iacobuzio-Donahue; Michael A Hollingsworth; Charles M Perou; Jen Jen Yeh
Journal:  PLoS Med       Date:  2010-07-13       Impact factor: 11.069

7.  CD109 Overexpression in Pancreatic Cancer Identified by Cell-Surface Glycoprotein Capture.

Authors:  Randy S Haun; Chun-Yang Fan; Samuel G Mackintosh; Hong Zhao; Alan J Tackett
Journal:  J Proteomics Bioinform       Date:  2014

Review 8.  Revisiting the Concept of Stress in the Prognosis of Solid Tumors: A Role for Stress Granules Proteins?

Authors:  Anaïs Aulas; Pascal Finetti; Shawn M Lyons; François Bertucci; Daniel Birnbaum; Claire Acquaviva; Emilie Mamessier
Journal:  Cancers (Basel)       Date:  2020-09-01       Impact factor: 6.639

9.  Overexpression of a Long Non-Coding RNA BC037916 is Associated with Pancreatic Tumorigenesis and Poor Prognosis.

Authors:  Gang Chen; Litao Xu; Guanxiong Ye; Junhua Lin; Zhiqiang Meng; Yehua Shen
Journal:  Onco Targets Ther       Date:  2021-01-05       Impact factor: 4.147

10.  Gene expression profiling of liver metastases and tumour invasion in pancreatic cancer using an orthotopic SCID mouse model.

Authors:  M Niedergethmann; F Alves; J K Neff; B Heidrich; N Aramin; L Li; C Pilarsky; R Grützmann; H Allgayer; S Post; N Gretz
Journal:  Br J Cancer       Date:  2007-10-16       Impact factor: 7.640

  10 in total

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