Literature DB >> 14733436

A marine dinoflagellate, Amphidinium eilatiensis n. sp., from the benthos of a mariculture sedimentation pond in Eilat, Israel.

John J Lee1, Raul Olea, Megan Cevasco, Xavier Pochon, Maria Correia, Muki Shpigel, Jan Pawlowski.   

Abstract

A species of Amphidinium bloomed in a mariculture sedimentation pond that was used to grow bivalves near the Gulf of Eilat, Israel. Its overall length averaged 13 microm, the hypocone was 11 microm, and its width was 8 microm. It has a ventral ridge. The sulcus begins at the longitudinal flagellar pore and does not project forward in the apex toward the transverse flagellar pore and left margin of the cingulum. The sulcus is a very shallow groove that projects variably about a third of the body length toward the antapex. The cingulum is a deep groove as it circles the cell from the left ventral side to the dorsal side and then becomes very shallow on the right ventral side as it arches posterior toward the longitudinal flagellar pore. Using a modified method for studying dinoflagellate chromosomes in the SEM, we observed 31 chromosomes. The plastid is dorsal and peripheral with 6 ventrally projecting peripheral digital lobes that wrap around the sides of the ventral and posterior nucleus. Amphidinium eilatiensis n. sp. is morphologically closest to Amphidinium carterae and Amphidinium rhynchocephalum, but it does not have the obvious thecal plates or polygonal units described for the former species. Instead, it has a series of spicules, bumps, and ridges on its surface. It differs from A. rhynchocephalum by two morphological characters: surface morphology and gross plastid architecture. The amplified fragments of the rDNA from A. eilatiensis n. sp. isolated from 2 separate sedimentation ponds in Eilat include the 3'- end of the SSU rDNA (about 100 nt), the whole ITS region (ITS1 + 5.8S + ITS2) and the 5'-end of the LSU rDNA (about 900 nts). The total length of the sequences ranged from 1,460 nt. (A. eilatiensis isolate #1) to 1,461 nts. (A. eilatiensis isolate #2). The latter sequences are identical, the difference in length being due to three insertions. Amphidinium eilatiensis is genetically more closely related to A. carterae than to A. klebsii, with respectively 2.36% and 6.93% of sequence divergence.

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Year:  2003        PMID: 14733436     DOI: 10.1111/j.1550-7408.2003.tb00270.x

Source DB:  PubMed          Journal:  J Eukaryot Microbiol        ISSN: 1066-5234            Impact factor:   3.346


  4 in total

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Journal:  Photosynth Res       Date:  2013-08-01       Impact factor: 3.573

2.  Genetic diversity, morphological uniformity and polyketide production in dinoflagellates (Amphidinium, Dinoflagellata).

Authors:  Shauna A Murray; Tamsyn Garby; Mona Hoppenrath; Brett A Neilan
Journal:  PLoS One       Date:  2012-06-04       Impact factor: 3.240

3.  Combined amplicon pyrosequencing assays reveal presence of the apicomplexan "type-N" (cf. Gemmocystis cylindrus) and Chromera velia on the Great Barrier Reef, Australia.

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Journal:  PLoS One       Date:  2013-09-30       Impact factor: 3.240

4.  Integrated omics unveil the secondary metabolic landscape of a basal dinoflagellate.

Authors:  Girish Beedessee; Takaaki Kubota; Asuka Arimoto; Koki Nishitsuji; Ross F Waller; Kanako Hisata; Shinichi Yamasaki; Noriyuki Satoh; Jun'ichi Kobayashi; Eiichi Shoguchi
Journal:  BMC Biol       Date:  2020-10-13       Impact factor: 7.431

  4 in total

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