Literature DB >> 14731729

A new ATP-binding fold in actin, hexokinase and Hsc70.

K C Holmes1, C Sander, A Valencia.   

Abstract

One of a cell biologist's favourite occupations is to discover the proteins that perform newly described functions in the cell. Very often lately, this has resulted in the identification of protein families whose related amino acid sequences reflect similar functions, but can proteins with totally unrelated sequences have similar structures and functions? In this review, Ken Holmes, Chris Sander and Alfonso Valencia describe the structural similarities between three well-known proteins that have no readily detectable primary sequence similarities but for which X-ray crystallography has revealed very similar structures. A comparison of their structures provides insights into their common mechanisms of action and into protein evolution, and has been used to detect related proteins in sequence data bases.

Entities:  

Year:  1993        PMID: 14731729     DOI: 10.1016/0962-8924(93)90161-s

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  26 in total

1.  Mechanisms of selectivity in channels and enzymes studied with interactive molecular dynamics.

Authors:  Paul Grayson; Emad Tajkhorshid; Klaus Schulten
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

2.  Sequence and comparative genomic analysis of actin-related proteins.

Authors:  Jean Muller; Yukako Oma; Laurent Vallar; Evelyne Friederich; Olivier Poch; Barbara Winsor
Journal:  Mol Biol Cell       Date:  2005-09-29       Impact factor: 4.138

3.  DNA segregation by the bacterial actin AlfA during Bacillus subtilis growth and development.

Authors:  Eric Becker; Nick C Herrera; Felizza Q Gunderson; Alan I Derman; Amber L Dance; Jennifer Sims; Rachel A Larsen; Joe Pogliano
Journal:  EMBO J       Date:  2006-11-30       Impact factor: 11.598

4.  A single amino acid change in Escherichia coli glycerol kinase abolishes glucose control of glycerol utilization in vivo.

Authors:  D W Pettigrew; W Z Liu; C Holmes; N D Meadow; S Roseman
Journal:  J Bacteriol       Date:  1996-05       Impact factor: 3.490

5.  Interaction of the Hsp70 molecular chaperone, DnaK, with its cochaperone DnaJ.

Authors:  W C Suh; W F Burkholder; C Z Lu; X Zhao; M E Gottesman; C A Gross
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

6.  Mutations in the DnaK chaperone affecting interaction with the DnaJ cochaperone.

Authors:  C S Gässler; A Buchberger; T Laufen; M P Mayer; H Schröder; A Valencia; B Bukau
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

Review 7.  Actin-related proteins localized in the nucleus: from discovery to novel roles in nuclear organization.

Authors:  Yukako Oma; Masahiko Harata
Journal:  Nucleus       Date:  2011 Jan-Feb       Impact factor: 4.197

8.  Crystallization of acetate kinase from Methanosarcina thermophila and prediction of its fold.

Authors:  K A Buss; C Ingram-Smith; J G Ferry; D A Sanders; M S Hasson
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

9.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of N-acetylmannosamine kinase from methicillin-resistant Staphylococcus aureus.

Authors:  Rachel A North; Simona Seizova; Anja Stampfli; Sarah A Kessans; Hironori Suzuki; Michael D W Griffin; Marc Kvansakul; Renwick C J Dobson
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-17       Impact factor: 1.056

10.  Novel pyrophosphate-forming acetate kinase from the protist Entamoeba histolytica.

Authors:  Matthew L Fowler; Cheryl Ingram-Smith; Kerry S Smith
Journal:  Eukaryot Cell       Date:  2012-08-17
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