Literature DB >> 14731008

Toward a computational description of nitrile hydratase: studies of the ground state bonding and spin-dependent energetics of mononuclear, non-heme Fe(III) complexes.

Christopher H Chang1, Amy J Boone, Rodney J Bartlett, Nigel G J Richards.   

Abstract

The metal coordination and spin state of the Fe(III) center in nitrile hydratase (NHase) has stimulated the synthesis of model complexes in efforts to understand the reactivity and spectroscopic properties of the enzyme. We report density functional theory (DFT) calculations on a number of Fe(III) complexes that have been prepared as models of the NHase metal center, together with others having similar ligands but different ground state spin multiplicities. Our results suggest that a DFT description of specific spin configurations in these systems does not suffer from significant amounts of spin contamination. In particular, B3LYP calculations not only reproduce the observed spin state preferences of these Fe(III) complexes but also predict spin-dependent structural properties consistent with those expected on the basis of ligand field models. An analysis of the natural bond orbital (NBO) transformation of the Kohn-Sham wave functions has enabled quantitation of the overall contribution to covalency of ligand-to-metal sigma-donation and pi-donation, and metal-to-ligand pi-back-bonding in these Fe(III) complexes at their BLYP-optimized geometries. Although sulfur ligands are the primary source of covalency in the Fe(III) complexes, our quantitative analysis suggests that hyperbonding between metal-bound nitrogens and an Fe-S bond represents a mechanism by which Fe-N covalency may arise. These studies establish the computational methodology for future theoretical investigations of the NHase Fe(III) center.

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Year:  2004        PMID: 14731008     DOI: 10.1021/ic0350032

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  4 in total

1.  Spectroscopy of non-heme iron thiolate complexes: insight into the electronic structure of the low-spin active site of nitrile hydratase.

Authors:  Pierre Kennepohl; Frank Neese; Dirk Schweitzer; Henry L Jackson; Julie A Kovacs; Edward I Solomon
Journal:  Inorg Chem       Date:  2005-03-21       Impact factor: 5.165

2.  Molecular dynamics simulations of the photoactive protein nitrile hydratase.

Authors:  Karina Kubiak; Wieslaw Nowak
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

3.  Spin-state-dependent oxygen sensitivity of iron dithiolates: sulfur oxygenation or disulfide formation.

Authors:  Martin G O'Toole; Majda Kreso; Pawel M Kozlowski; Mark S Mashuta; Craig A Grapperhaus
Journal:  J Biol Inorg Chem       Date:  2008-07-17       Impact factor: 3.358

4.  Experimental and Theoretical Identification of the Origin of Magnetic Anisotropy in Intermediate Spin Iron(III) Complexes.

Authors:  Lianke Wang; Matija Zlatar; Filip Vlahović; Serhiy Demeshko; Christian Philouze; Florian Molton; Marcello Gennari; Franc Meyer; Carole Duboc; Maja Gruden
Journal:  Chemistry       Date:  2018-03-02       Impact factor: 5.236

  4 in total

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