Literature DB >> 14730027

L-Myc protein synthesis is initiated by internal ribosome entry.

Catherine L Jopling1, Keith A Spriggs, Sally A Mitchell, Mark Stoneley, Anne E Willis.   

Abstract

An internal ribosome entry segment (IRES) has been identified in the 5' untranslated region (5' UTR) of two members of the myc family of proto-oncogenes, c-myc and N-myc. Hence, the synthesis of c-Myc and N-Myc polypeptides can involve the alternative mechanism of internal initiation. Here, we show that the 5' UTR of L-myc, another myc family member, also contains an IRES. Previous studies have shown that the translation of mRNAs containing the c-myc and N-myc IRESs can involve both cap-dependent initiation and internal initiation. In contrast, the data presented here suggest that internal initiation can account for all of the translation initiation that occurs on an mRNA with the L-myc IRES in its 5' UTR. Like many other cellular IRESs, the L-myc IRES appears to be modular in nature and the entire 5' UTR is required for maximum IRES efficiency. The ribosome entry window within the L-myc IRES is located some distance upstream of the initiation codon, and thus, this IRES uses a "land and scan" mechanism to initiate translation. Finally, we have derived a secondary structural model for the IRES. The model confirms that the L-myc IRES is highly structured and predicts that a pseudoknot may form near the 5' end of the mRNA.

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Year:  2004        PMID: 14730027      PMCID: PMC1370540          DOI: 10.1261/rna.5138804

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  37 in total

1.  Differentiation-induced internal translation of c-sis mRNA: analysis of the cis elements and their differentiation-linked binding to the hnRNP C protein.

Authors:  O Sella; G Gerlitz; S Y Le; O Elroy-Stein
Journal:  Mol Cell Biol       Date:  1999-08       Impact factor: 4.272

2.  The zipper model of translational control: a small upstream ORF is the switch that controls structural remodeling of an mRNA leader.

Authors:  Ibrahim Yaman; James Fernandez; Haiyan Liu; Mark Caprara; Anton A Komar; Antonis E Koromilas; Lingyin Zhou; Martin D Snider; Donalyn Scheuner; Randal J Kaufman; Maria Hatzoglou
Journal:  Cell       Date:  2003-05-16       Impact factor: 41.582

3.  Structure and expression of the human L-myc gene reveal a complex pattern of alternative mRNA processing.

Authors:  F Kaye; J Battey; M Nau; B Brooks; E Seifter; J De Greve; M Birrer; E Sausville; J Minna
Journal:  Mol Cell Biol       Date:  1988-01       Impact factor: 4.272

4.  Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension.

Authors:  S Stern; D Moazed; H F Noller
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

5.  Members of the poly (rC) binding protein family stimulate the activity of the c-myc internal ribosome entry segment in vitro and in vivo.

Authors:  Joanne R Evans; Sally A Mitchell; Keith A Spriggs; Jerzy Ostrowski; Karol Bomsztyk; Dirk Ostarek; Anne E Willis
Journal:  Oncogene       Date:  2003-09-11       Impact factor: 9.867

6.  Differential expression of myc family genes during murine development.

Authors:  K A Zimmerman; G D Yancopoulos; R G Collum; R K Smith; N E Kohl; K A Denis; M M Nau; O N Witte; D Toran-Allerand; C E Gee
Journal:  Nature       Date:  1986 Feb 27-Mar 5       Impact factor: 49.962

7.  L-myc cooperates with ras to transform primary rat embryo fibroblasts.

Authors:  M J Birrer; S Segal; J S DeGreve; F Kaye; E A Sausville; J D Minna
Journal:  Mol Cell Biol       Date:  1988-06       Impact factor: 4.272

8.  L-myc, a new myc-related gene amplified and expressed in human small cell lung cancer.

Authors:  M M Nau; B J Brooks; J Battey; E Sausville; A F Gazdar; I R Kirsch; O W McBride; V Bertness; G F Hollis; J D Minna
Journal:  Nature       Date:  1985 Nov 7-13       Impact factor: 49.962

9.  Polypyrimidine tract binding protein and poly r(C) binding protein 1 interact with the BAG-1 IRES and stimulate its activity in vitro and in vivo.

Authors:  Becky M Pickering; Sally A Mitchell; Joanne R Evans; Anne E Willis
Journal:  Nucleic Acids Res       Date:  2003-01-15       Impact factor: 16.971

10.  Structure and expression of the murine L-myc gene.

Authors:  E Legouy; R DePinho; K Zimmerman; R Collum; G Yancopoulos; L Mitsock; R Kriz; F W Alt
Journal:  EMBO J       Date:  1987-11       Impact factor: 11.598

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  26 in total

Review 1.  Searching for IRES.

Authors:  Stephen D Baird; Marcel Turcotte; Robert G Korneluk; Martin Holcik
Journal:  RNA       Date:  2006-09-06       Impact factor: 4.942

2.  Expression of truncated eukaryotic initiation factor 3e (eIF3e) resulting from integration of mouse mammary tumor virus (MMTV) causes a shift from cap-dependent to cap-independent translation.

Authors:  David Chiluiza; Sharon Bargo; Robert Callahan; Robert E Rhoads
Journal:  J Biol Chem       Date:  2011-07-07       Impact factor: 5.157

3.  Secondary RNA structure and nucleotide specificity contribute to internal initiation mediated by the human tau 5' leader.

Authors:  Bethany L Veo; Leslie A Krushel
Journal:  RNA Biol       Date:  2012-09-20       Impact factor: 4.652

4.  Identification of a motif that mediates polypyrimidine tract-binding protein-dependent internal ribosome entry.

Authors:  Sally A Mitchell; Keith A Spriggs; Martin Bushell; Joanne R Evans; Mark Stoneley; John P C Le Quesne; Ruth V Spriggs; Anne E Willis
Journal:  Genes Dev       Date:  2005-07-01       Impact factor: 11.361

5.  An miRNA-mediated therapy for SCA6 blocks IRES-driven translation of the CACNA1A second cistron.

Authors:  Yu Miyazaki; Xiaofei Du; Shin-Ichi Muramatsu; Christopher M Gomez
Journal:  Sci Transl Med       Date:  2016-07-13       Impact factor: 17.956

Review 6.  The structures of nonprotein-coding RNAs that drive internal ribosome entry site function.

Authors:  Terra-Dawn M Plank; Jeffrey S Kieft
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-01-03       Impact factor: 9.957

7.  New tRNA contacts facilitate ligand binding in a Mycobacterium smegmatis T box riboswitch.

Authors:  Anna V Sherwood; Jane K Frandsen; Frank J Grundy; Tina M Henkin
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-26       Impact factor: 11.205

8.  Identification of internal ribosome entry segment (IRES)-trans-acting factors for the Myc family of IRESs.

Authors:  Laura C Cobbold; Keith A Spriggs; Stephen J Haines; Helen C Dobbyn; Christopher Hayes; Cornelia H de Moor; Kathryn S Lilley; Martin Bushell; Anne E Willis
Journal:  Mol Cell Biol       Date:  2007-10-29       Impact factor: 4.272

9.  Structure and activity of the internal ribosome entry site within the human p27 Kip1 5'-untranslated region.

Authors:  Jennifer Coleman; W Keith Miskimins
Journal:  RNA Biol       Date:  2009-01-05       Impact factor: 4.652

10.  The human insulin receptor mRNA contains a functional internal ribosome entry segment.

Authors:  Keith A Spriggs; Laura C Cobbold; Simon H Ridley; Mark Coldwell; Andrew Bottley; Martin Bushell; Anne E Willis; Kenneth Siddle
Journal:  Nucleic Acids Res       Date:  2009-08-04       Impact factor: 16.971

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