EPR study of the dynamic behavior of cis,cis-1,3,5-triaminocyclohexane Cu(II) complex on B-form DNA-fibers.

The orientation and the dynamic behavior of [Cu(TACH)](2+)(TACH = cis,cis-1,3,5-triaminocyclohexane) on B-form DNA-fiber have been investigated by electron paramagnetic resonance (EPR) spectroscopy. The complex showed novel EPR spectra indicating that a rapidly moving species (X) is in equilibrium with a stereospecifically oriented species (Y) on the DNA-fiber in the range 20 and -20 degrees C. The thermodynamic parameters Delta H and Delta S of the equilibrium X right arrow over left arrow Y are respectively -51.3 kJmol(-1) and -1.9 x 10(2) JK(-1)mol(-1) for the DNA-fibers prepared at pH 7 and -47.1 kJmol(-1) and -1.7 x 10(2) JK(-1)mol(-1) for the DNA-fibers prepared at pH 9. These results suggest that the equilibrium involved a concerted structural change of the coordination sphere and the hydrogen bonding network around the complex on the B-form DNA-fibers. The orientation of the species Y was completely randomized below -20 degrees C, indicating that the freezing of the water molecules in the DNA-fibers breaks down the hydrogen bonding network which regulated the orientation of the complex in the DNA-fibers. The correlation between the observed dynamic behavior and the hydrolytic ability of the complex was also discussed.