Literature DB >> 14728226

Contextualizing heterogeneous data for integration and inference.

Zachary Pincus1, Mark A Musen.   

Abstract

Systems that attempt to integrate and analyze data from multiple data sources are greatly aided by the addition of specific semantic and metadata "context" that explicitly describes what a data value means. In this paper, we describe a systematic approach to constructing models of data and their context. Our approach provides a generic "template" for constructing such models. For each data source, a developer creates a customized model by filling in the tem-plate with predefined attributes and value. This approach facilitates model construction and provides consistent syntax and semantics among models created with the template. Systems that can process the template structure and attribute values can reason about any model so described. We used the template to create a detailed knowledge base for syndromic surveillance data integration and analysis. The knowledge base provided support for data integration, translation, and analysis methods.

Mesh:

Year:  2003        PMID: 14728226      PMCID: PMC1479915     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  2 in total

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Authors:  David L Buckeridge; Justin Graham; Martin J O'Connor; Michael K Choy; Samson W Tu; Mark A Musen
Journal:  Proc AMIA Symp       Date:  2002

2.  Surveillance data for waterborne illness detection: an assessment following a massive waterborne outbreak of Cryptosporidium infection.

Authors:  M E Proctor; K A Blair; J P Davis
Journal:  Epidemiol Infect       Date:  1998-02       Impact factor: 2.451

  2 in total
  3 in total

1.  BioSTORM: a system for automated surveillance of diverse data sources.

Authors:  Martin J O'Connor; David L Buckeridge; Michael Choy; Monica Crubezy; Zachary Pincus; Mark A Musen
Journal:  AMIA Annu Symp Proc       Date:  2003

2.  Software-engineering challenges of building and deploying reusable problem solvers.

Authors:  Martin J O'Connor; Csongor Nyulas; Samson Tu; David L Buckeridge; Anna Okhmatovskaia; Mark A Musen
Journal:  Artif Intell Eng Des Anal Manuf       Date:  2009-11       Impact factor: 1.671

3.  Ontology driven integration platform for clinical and translational research.

Authors:  Parsa Mirhaji; Min Zhu; Mattew Vagnoni; Elmer V Bernstam; Jiajie Zhang; Jack W Smith
Journal:  BMC Bioinformatics       Date:  2009-02-05       Impact factor: 3.169

  3 in total

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