Literature DB >> 14726591

Heterodimeric GTPase core of the SRP targeting complex.

Pamela J Focia1, Irina V Shepotinovskaya, James A Seidler, Douglas M Freymann.   

Abstract

Two structurally homologous guanosine triphosphatase (GTPase) domains interact directly during signal recognition particle (SRP)-mediated cotranslational targeting of proteins to the membrane. The 2.05 angstrom structure of a complex of the NG GTPase domains of Ffh and FtsY reveals a remarkably symmetric heterodimer sequestering a composite active site that contains two bound nucleotides. The structure explains the coordinate activation of the two GTPases. Conformational changes coupled to formation of their extensive interface may function allosterically to signal formation of the targeting complex to the signal-sequence binding site and the translocon. We propose that the complex represents a molecular "latch" and that its disengagement is regulated by completion of assembly of the GTPase active site.

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Year:  2004        PMID: 14726591      PMCID: PMC3546161          DOI: 10.1126/science.1090827

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  34 in total

1.  Substrate twinning activates the signal recognition particle and its receptor.

Authors:  Pascal F Egea; Shu-Ou Shan; Johanna Napetschnig; David F Savage; Peter Walter; Robert M Stroud
Journal:  Nature       Date:  2004-01-15       Impact factor: 49.962

2.  wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models.

Authors:  A Perrakis; T K Sixma; K S Wilson; V S Lamzin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-07-01

3.  The signal recognition particle receptor of Escherichia coli (FtsY) has a nucleotide exchange factor built into the GTPase domain.

Authors:  C Moser; O Mol; R S Goody; I Sinning
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-14       Impact factor: 11.205

4.  Structure of the conserved GTPase domain of the signal recognition particle.

Authors:  D M Freymann; R J Keenan; R M Stroud; P Walter
Journal:  Nature       Date:  1997-01-23       Impact factor: 49.962

5.  Empty site forms of the SRP54 and SR alpha GTPases mediate targeting of ribosome-nascent chain complexes to the endoplasmic reticulum.

Authors:  P J Rapiejko; R Gilmore
Journal:  Cell       Date:  1997-05-30       Impact factor: 41.582

6.  Model for signal sequence recognition from amino-acid sequence of 54K subunit of signal recognition particle.

Authors:  H D Bernstein; M A Poritz; K Strub; P J Hoben; S Brenner; P Walter
Journal:  Nature       Date:  1989-08-10       Impact factor: 49.962

7.  Homology of 54K protein of signal-recognition particle, docking protein and two E. coli proteins with putative GTP-binding domains.

Authors:  K Römisch; J Webb; J Herz; S Prehn; R Frank; M Vingron; B Dobberstein
Journal:  Nature       Date:  1989-08-10       Impact factor: 49.962

Review 8.  The guanine nucleotide-binding switch in three dimensions.

Authors:  I R Vetter; A Wittinghofer
Journal:  Science       Date:  2001-11-09       Impact factor: 47.728

9.  Requirement of GTP hydrolysis for dissociation of the signal recognition particle from its receptor.

Authors:  T Connolly; P J Rapiejko; R Gilmore
Journal:  Science       Date:  1991-05-24       Impact factor: 47.728

10.  Reciprocal stimulation of GTP hydrolysis by two directly interacting GTPases.

Authors:  T Powers; P Walter
Journal:  Science       Date:  1995-09-08       Impact factor: 47.728

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  117 in total

1.  Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry.

Authors:  Feixia Chu; Shu-ou Shan; Demetri T Moustakas; Frank Alber; Pascal F Egea; Robert M Stroud; Peter Walter; Alma L Burlingame
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-16       Impact factor: 11.205

2.  Translation elongation regulates substrate selection by the signal recognition particle.

Authors:  Dawei Zhang; Shu-ou Shan
Journal:  J Biol Chem       Date:  2012-01-06       Impact factor: 5.157

3.  Structural basis for the molecular evolution of SRP-GTPase activation by protein.

Authors:  Gert Bange; Nico Kümmerer; Przemyslaw Grudnik; Robert Lindner; Georg Petzold; Dieter Kressler; Ed Hurt; Klemens Wild; Irmgard Sinning
Journal:  Nat Struct Mol Biol       Date:  2011-11-06       Impact factor: 15.369

Review 4.  Protein secretion and the endoplasmic reticulum.

Authors:  Adam M Benham
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-08-01       Impact factor: 10.005

5.  Elucidating the higher-order structure of biopolymers by structural probing and mass spectrometry: MS3D.

Authors:  Daniele Fabris; Eizadora T Yu
Journal:  J Mass Spectrom       Date:  2010-08       Impact factor: 1.982

6.  Transient tether between the SRP RNA and SRP receptor ensures efficient cargo delivery during cotranslational protein targeting.

Authors:  Kuang Shen; Shu-ou Shan
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

7.  SRP RNA controls a conformational switch regulating the SRP-SRP receptor interaction.

Authors:  Saskia B Neher; Niels Bradshaw; Stephen N Floor; John D Gross; Peter Walter
Journal:  Nat Struct Mol Biol       Date:  2008-09       Impact factor: 15.369

8.  The structural basis of FtsY recruitment and GTPase activation by SRP RNA.

Authors:  Felix Voigts-Hoffmann; Nikolaus Schmitz; Kuang Shen; Shu-Ou Shan; Sandro F Ataide; Nenad Ban
Journal:  Mol Cell       Date:  2013-11-07       Impact factor: 17.970

9.  Ligand binding modulates the mechanical stability of dihydrofolate reductase.

Authors:  Sri Rama Koti Ainavarapu; Lewyn Li; Carmen L Badilla; Julio M Fernandez
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

10.  The membrane-binding motif of the chloroplast signal recognition particle receptor (cpFtsY) regulates GTPase activity.

Authors:  Naomi J Marty; Dakshinamurthy Rajalingam; Alicia D Kight; Nathaniel E Lewis; Daniel Fologea; Thallapuranam Krishnaswamy Suresh Kumar; Ralph L Henry; Robyn L Goforth
Journal:  J Biol Chem       Date:  2009-03-17       Impact factor: 5.157

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