Literature DB >> 14724750

Soft picture of lateral heterogeneity in biomembranes.

J Strancar1, T Koklic, Z Arsov.   

Abstract

Standard methods of characterization of electron paramagnetic resonance (EPR) spectra of spin-labeled biomembranes limit the resolution of lateral heterogeneity to only two or three domain types. This disables examination of the structure-function relationship in complex membranes, which might be composed of a larger number of different domain types. To enable exploration of this kind, a new approach based on analysis of EPR spectra with multi-run, hybrid evolutionary optimization is proposed here. From the multiple runs a quasi-continuous distribution of membrane spectral parameters (order parameter, proportion of spectral component, polarity correction factor, rotational correlation time and broadening constant) can be constructed and presented by a new presentation technique CODE (colored distribution of E PR spectral parameters). Through this the concept of a "soft" picture of membrane heterogeneity is introduced, in contrast to the standard "discrete" domain picture. The "soft" characterization method, established on synthetic spectra, was used to examine the lateral heterogeneity of liposome membranes as well as of membranes of neutrophils from healthy and asthmatic horses. In liposome membranes the determined number of domain types was the same as already established by standard procedures of EPR spectra line-shape interpretation. In membranes of neutrophils a quasi-continuous distribution of membrane domain properties was detected by the new method.

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Year:  2003        PMID: 14724750     DOI: 10.1007/s00232-003-0633-z

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  26 in total

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Journal:  Biophys J       Date:  1999-08       Impact factor: 4.033

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Journal:  Biochemistry       Date:  1996-07-16       Impact factor: 3.162

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Journal:  Curr Opin Struct Biol       Date:  1997-08       Impact factor: 6.809

7.  Determination of fluid and gel domain sizes in two-component, two-phase lipid bilayers. An electron spin resonance spin label study.

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Journal:  Biophys J       Date:  1992-08       Impact factor: 4.033

8.  Mechanical aspects of membrane thermodynamics. Estimation of the mechanical properties of lipid membranes close to the chain melting transition from calorimetry.

Authors:  T Heimburg
Journal:  Biochim Biophys Acta       Date:  1998-12-09

Review 9.  Lipid domains and lipid/protein interactions in biological membranes.

Authors:  J F Tocanne; L Cézanne; A Lopez; B Piknova; V Schram; J F Tournier; M Welby
Journal:  Chem Phys Lipids       Date:  1994-09-06       Impact factor: 3.329

Review 10.  Lipid domains in model and biological membranes.

Authors:  R Welti; M Glaser
Journal:  Chem Phys Lipids       Date:  1994-09-06       Impact factor: 3.329

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  7 in total

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Journal:  Biophys J       Date:  2009-05-06       Impact factor: 4.033

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Authors:  David Stopar; Janez Strancar; Ruud B Spruijt; Marcus A Hemminga
Journal:  Biophys J       Date:  2006-08-11       Impact factor: 4.033

Review 3.  Temperature- and pH-induced structural changes in the membrane of the hyperthermophilic archaeon Aeropyrum pernix K1.

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4.  Rigidification of neutral lipid bilayers in the presence of salts.

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Journal:  Biophys J       Date:  2007-06-22       Impact factor: 4.033

5.  Effect of growth medium pH of Aeropyrum pernix on structural properties and fluidity of archaeosomes.

Authors:  Ajda Ota; Dejan Gmajner; Marjeta Šentjurc; Nataša Poklar Ulrih
Journal:  Archaea       Date:  2012-06-13       Impact factor: 3.273

6.  Influence of cancerostatic perifosine on membrane fluidity of liposomes and different cell lines as measured by electron paramagnetic resonance.

Authors:  Rok Podlipec; Tilen Koklic; Janez Strancar; Janez Mravljak; Marjeta Sentjurc
Journal:  Croat Med J       Date:  2012-12       Impact factor: 1.351

7.  Electron Paramagnetic Resonance Gives Evidence for the Presence of Type 1 Gonadotropin-Releasing Hormone Receptor (GnRH-R) in Subdomains of Lipid Rafts.

Authors:  Tilen Koklič; Alenka Hrovat; Ramon Guixà-González; Ismael Rodríguez-Espigares; Damaris Navio; Robert Frangež; Matjaž Uršič; Valentina Kubale; Ana Plemenitaš; Jana Selent; Marjeta Šentjurc; Milka Vrecl
Journal:  Molecules       Date:  2021-02-12       Impact factor: 4.411

  7 in total

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