Literature DB >> 14722315

Severe acute respiratory syndrome coronavirus sequence characteristics and evolutionary rate estimate from maximum likelihood analysis.

Marco Salemi, Walter M Fitch, Massimo Ciccozzi, Maria Jose Ruiz-Alvarez, Giovanni Rezza, Martha J Lewis.   

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Year:  2004        PMID： 14722315      PMCID： PMC321409          DOI： 10.1128/jvi.78.3.1602-1603.2004

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


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  4 in total

1.  Predicting the evolution of human influenza A.

Authors:  R M Bush; C A Bender; K Subbarao; N J Cox; W M Fitch
Journal:  Science       Date:  1999-12-03       Impact factor: 47.728

2.  Identification of a novel coronavirus in patients with severe acute respiratory syndrome.

Authors:  Christian Drosten; Stephan Günther; Wolfgang Preiser; Sylvie van der Werf; Hans-Reinhard Brodt; Stephan Becker; Holger Rabenau; Marcus Panning; Larissa Kolesnikova; Ron A M Fouchier; Annemarie Berger; Ana-Maria Burguière; Jindrich Cinatl; Markus Eickmann; Nicolas Escriou; Klaus Grywna; Stefanie Kramme; Jean-Claude Manuguerra; Stefanie Müller; Volker Rickerts; Martin Stürmer; Simon Vieth; Hans-Dieter Klenk; Albert D M E Osterhaus; Herbert Schmitz; Hans Wilhelm Doerr
Journal:  N Engl J Med       Date:  2003-04-10       Impact factor: 91.245

3.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

4.  Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection.

Authors:  Yi Jun Ruan; Chia Lin Wei; Ai Ling Ee; Vinsensius B Vega; Herve Thoreau; Se Thoe Yun Su; Jer-Ming Chia; Patrick Ng; Kuo Ping Chiu; Landri Lim; Tao Zhang; Chan Kwai Peng; Ean Oon Lynette Lin; Ng Mah Lee; Sin Leo Yee; Lisa F P Ng; Ren Ee Chee; Lawrence W Stanton; Philip M Long; Edison T Liu
Journal:  Lancet       Date:  2003-05-24       Impact factor: 79.321
  4 in total
  21 in total

1.  Genetic variability of human respiratory coronavirus OC43.

Authors:  Leen Vijgen; Philippe Lemey; Els Keyaerts; Marc Van Ranst
Journal:  J Virol       Date:  2005-03       Impact factor: 5.103

2.  Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event.

Authors:  Leen Vijgen; Els Keyaerts; Elien Moës; Inge Thoelen; Elke Wollants; Philippe Lemey; Anne-Mieke Vandamme; Marc Van Ranst
Journal:  J Virol       Date:  2005-02       Impact factor: 5.103

Review 3.  SARS-CoV-2 mutations: the biological trackway towards viral fitness.

Authors:  Parinita Majumdar; Sougata Niyogi
Journal:  Epidemiol Infect       Date:  2021-04-30       Impact factor: 2.451

4.  Coronavirus genomics and bioinformatics analysis.

Authors:  Patrick C Y Woo; Yi Huang; Susanna K P Lau; Kwok-Yung Yuen
Journal:  Viruses       Date:  2010-08-24       Impact factor: 5.818

5.  Rampant C→U Hypermutation in the Genomes of SARS-CoV-2 and Other Coronaviruses: Causes and Consequences for Their Short- and Long-Term Evolutionary Trajectories.

Authors:  P Simmonds
Journal:  mSphere       Date:  2020-06-24       Impact factor: 4.389

Review 6.  Betacoronavirus Genomes: How Genomic Information has been Used to Deal with Past Outbreaks and the COVID-19 Pandemic.

Authors:  Alejandro Llanes; Carlos M Restrepo; Zuleima Caballero; Sreekumari Rajeev; Melissa A Kennedy; Ricardo Lleonart
Journal:  Int J Mol Sci       Date:  2020-06-26       Impact factor: 5.923

7.  Origin and dissemination of hepatitis B virus genotype C in East Asia revealed by phylodynamic analysis and historical correlates.

Authors:  Serena Y C Lin; Brittany Rife Magalis; Marco Salemi; Hsin-Fu Liu
Journal:  J Viral Hepat       Date:  2018-10-17       Impact factor: 3.728

8.  Distant relatives of severe acute respiratory syndrome coronavirus and close relatives of human coronavirus 229E in bats, Ghana.

Authors:  Susanne Pfefferle; Samuel Oppong; Jan Felix Drexler; Florian Gloza-Rausch; Anne Ipsen; Antje Seebens; Marcel A Müller; Augustina Annan; Peter Vallo; Yaw Adu-Sarkodie; Thomas F Kruppa; Christian Drosten
Journal:  Emerg Infect Dis       Date:  2009-09       Impact factor: 6.883

9.  Full-genome deep sequencing and phylogenetic analysis of novel human betacoronavirus.

Authors:  Matthew Cotten; Tommy T Lam; Simon J Watson; Anne L Palser; Velislava Petrova; Paul Grant; Oliver G Pybus; Andrew Rambaut; Yi Guan; Deenan Pillay; Paul Kellam; Eleni Nastouli
Journal:  Emerg Infect Dis       Date:  2013-05       Impact factor: 6.883

10.  Mutation in spike protein cleavage site and pathogenesis of feline coronavirus.

Authors:  Beth N Licitra; Jean K Millet; Andrew D Regan; Brian S Hamilton; Vera D Rinaldi; Gerald E Duhamel; Gary R Whittaker
Journal:  Emerg Infect Dis       Date:  2013-07       Impact factor: 6.883
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