Literature DB >> 14715313

Strand specific quantitative real-time PCR to study replication of hepatitis C virus genome.

Florence Komurian-Pradel1, Magali Perret, Birgit Deiman, Mireille Sodoyer, Vincent Lotteau, Glaucia Paranhos-Baccalà, Patrice André.   

Abstract

Qualitative detection of negative hepatitis C virus (HCV) RNA has been used widely to demonstrate HCV replication. However, relative quantitation of both positive and negative HCV RNA strands has never been reported for studying viral genome replication. A strand specific real-time PCR carried out in the highly conserved 5'-non-coding region of HCV genome and monitored either by the DNA binding dye SYBR Green I or by molecular beacons is described. Using these techniques, it was found that negative HCV RNA strand was a 100-1000 times less abundant than the positive strand in the liver of HCV infected patients.

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Year:  2004        PMID: 14715313     DOI: 10.1016/j.jviromet.2003.10.004

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  33 in total

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Journal:  J Virol Methods       Date:  2012-05-22       Impact factor: 2.014

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Journal:  Proc Biol Sci       Date:  2015-03-22       Impact factor: 5.349

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Authors:  Zhilong Wang; Hui Kheng Chua; Ayu A R A Gusti; Fang He; Beau Fenner; Ivanus Manopo; Hai Wang; Jimmy Kwang
Journal:  J Virol       Date:  2005-07       Impact factor: 5.103

4.  Anti-hepatitis C virus potency of a new autophagy inhibitor using human liver slices model.

Authors:  Sylvie Lagaye; Sonia Brun; Jesintha Gaston; Hong Shen; Ruzena Stranska; Claire Camus; Clarisse Dubray; Géraldine Rousseau; Pierre-Philippe Massault; Jerôme Courcambeck; Firas Bassisi; Philippe Halfon; Stanislas Pol
Journal:  World J Hepatol       Date:  2016-07-28

5.  Short-course, direct-acting antivirals and ezetimibe to prevent HCV infection in recipients of organs from HCV-infected donors: a phase 3, single-centre, open-label study.

Authors:  Jordan J Feld; Marcelo Cypel; Deepali Kumar; Harel Dahari; Rafaela Vanin Pinto Ribeiro; Nikki Marks; Nellie Kamkar; Ilona Bahinskaya; Fernanda Q Onofrio; Mohamed A Zahoor; Orlando Cerrochi; Kathryn Tinckam; S Joseph Kim; Jeffrey Schiff; Trevor W Reichman; Michael McDonald; Carolina Alba; Thomas K Waddell; Gonzalo Sapisochin; Markus Selzner; Shaf Keshavjee; Harry L A Janssen; Bettina E Hansen; Lianne G Singer; Atul Humar
Journal:  Lancet Gastroenterol Hepatol       Date:  2020-05-06

6.  Hepatitis C virus (HCV) interaction with astrocytes: nonproductive infection and induction of IL-18.

Authors:  Ziqing Liu; Fang Zhao; Johnny J He
Journal:  J Neurovirol       Date:  2014-03-27       Impact factor: 2.643

7.  Determining the involvement and therapeutic implications of host cellular factors in hepatitis C virus cell-to-cell spread.

Authors:  Naina Barretto; Bruno Sainz; Snawar Hussain; Susan L Uprichard
Journal:  J Virol       Date:  2014-02-19       Impact factor: 5.103

8.  Identification of GBF1 as a cellular factor required for hepatitis C virus RNA replication.

Authors:  Lucie Goueslain; Khaled Alsaleh; Pauline Horellou; Philippe Roingeard; Véronique Descamps; Gilles Duverlie; Yann Ciczora; Czeslaw Wychowski; Jean Dubuisson; Yves Rouillé
Journal:  J Virol       Date:  2009-11-11       Impact factor: 5.103

9.  The DNA virus Invertebrate iridescent virus 6 is a target of the Drosophila RNAi machinery.

Authors:  Alfred W Bronkhorst; Koen W R van Cleef; Nicolas Vodovar; Ikbal Agah Ince; Hervé Blanc; Just M Vlak; Maria-Carla Saleh; Ronald P van Rij
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-14       Impact factor: 11.205

10.  Human rhinovirus 1B exposure induces phosphatidylinositol 3-kinase-dependent airway inflammation in mice.

Authors:  Dawn C Newcomb; Umadevi S Sajjan; Deepti R Nagarkar; Qiong Wang; Suparna Nanua; Ying Zhou; Christina L McHenry; Kenneth T Hennrick; Wan C Tsai; J Kelley Bentley; Nicholas W Lukacs; Sebastian L Johnston; Marc B Hershenson
Journal:  Am J Respir Crit Care Med       Date:  2008-02-14       Impact factor: 21.405

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