Literature DB >> 14708573

The peroxidase gene family in plants: a phylogenetic overview.

Laurent Duroux1, Karen G Welinder.   

Abstract

The 73 class III peroxidase genes in Arabidopsis thaliana were used for surveying the evolutionary relationships among peroxidases in the plant kingdom. In Arabidopsis, the 73 genes were clustered in robust similarity groups. Comparison to peroxidases from other angiosperms showed that the diversity observed in Arabidopsis preceded the radiation of dicots, whereas some clusters were absent from grasses. Grasses contained some unique peroxidase clusters not seen in dicot plants. We found peroxidases in other major groups of land plants but not in algae. This might indicate that the class III peroxidase gene family appeared with the colonization of land by plants. The present survey may be used as a rational basis for further investigating the functional roles of class III peroxidases.

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Year:  2003        PMID: 14708573     DOI: 10.1007/s00239-003-2489-3

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  44 in total

1.  Molecular evidence for the early colonization of land by fungi and plants.

Authors:  D S Heckman; D M Geiser; B R Eidell; R L Stauffer; N L Kardos; S B Hedges
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

Review 2.  Substrate binding and catalysis in heme peroxidases.

Authors:  A T Smith; N C Veitch
Journal:  Curr Opin Chem Biol       Date:  1998-04       Impact factor: 8.822

Review 3.  Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis.

Authors:  J A Eisen
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  Structure of barley grain peroxidase refined at 1.9-A resolution. A plant peroxidase reversibly inactivated at neutral pH.

Authors:  A Henriksen; K G Welinder; M Gajhede
Journal:  J Biol Chem       Date:  1998-01-23       Impact factor: 5.157

5.  Structural interactions between horseradish peroxidase C and the substrate benzhydroxamic acid determined by X-ray crystallography.

Authors:  A Henriksen; D J Schuller; K Meno; K G Welinder; A T Smith; M Gajhede
Journal:  Biochemistry       Date:  1998-06-02       Impact factor: 3.162

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana.

Authors:  Michael Tognolli; Claude Penel; Hubert Greppin; Patrice Simon
Journal:  Gene       Date:  2002-04-17       Impact factor: 3.688

8.  Genomic DNA structure of a gene encoding cytosolic ascorbate peroxidase from Arabidopsis thaliana.

Authors:  A Kubo; H Saji; K Tanaka; N Kondo
Journal:  FEBS Lett       Date:  1993-01-11       Impact factor: 4.124

9.  Structure of soybean seed coat peroxidase: a plant peroxidase with unusual stability and haem-apoprotein interactions.

Authors:  A Henriksen; O Mirza; C Indiani; K Teilum; G Smulevich; K G Welinder; M Gajhede
Journal:  Protein Sci       Date:  2001-01       Impact factor: 6.725

10.  Arabidopsis ATP A2 peroxidase. Expression and high-resolution structure of a plant peroxidase with implications for lignification.

Authors:  L Ostergaard; K Teilum; O Mirza; O Mattsson; M Petersen; K G Welinder; J Mundy; M Gajhede; A Henriksen
Journal:  Plant Mol Biol       Date:  2000-09       Impact factor: 4.076

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  31 in total

1.  A symbiotic plant peroxidase involved in bacterial invasion of the tropical legume Sesbania rostrata.

Authors:  Jeroen Den Herder; Sam Lievens; Stephane Rombauts; Marcelle Holsters; Sofie Goormachtig
Journal:  Plant Physiol       Date:  2007-03-23       Impact factor: 8.340

2.  Molecular evolution and diversity of lignin degrading heme peroxidases in the Agaricomycetes.

Authors:  Ingo Morgenstern; Shlomit Klopman; David S Hibbett
Journal:  J Mol Evol       Date:  2008-03       Impact factor: 2.395

3.  Polyploidy creates higher diversity among Cynodon accessions as assessed by molecular markers.

Authors:  Osman Gulsen; Songul Sever-Mutlu; Nedim Mutlu; Metin Tuna; Osman Karaguzel; Robert C Shearman; Terrance P Riordan; Tiffany M Heng-Moss
Journal:  Theor Appl Genet       Date:  2009-02-20       Impact factor: 5.699

4.  Maize peroxidase Px5 has a highly conserved sequence in inbreds resistant to mycotoxin producing fungi which enhances fungal and insect resistance.

Authors:  Patrick F Dowd; Eric T Johnson
Journal:  J Plant Res       Date:  2015-12-10       Impact factor: 2.629

5.  PRX9 and PRX40 Are Extensin Peroxidases Essential for Maintaining Tapetum and Microspore Cell Wall Integrity during Arabidopsis Anther Development.

Authors:  Joseph R Jacobowitz; William C Doyle; Jing-Ke Weng
Journal:  Plant Cell       Date:  2019-03-18       Impact factor: 11.277

6.  Analysis of the molecular evolutionary history of the ascorbate peroxidase gene family: inferences from the rice genome.

Authors:  Felipe Karam Teixeira; Larissa Menezes-Benavente; Rogério Margis; Márcia Margis-Pinheiro
Journal:  J Mol Evol       Date:  2004-12       Impact factor: 2.395

7.  Arabidopsis peroxidase AtPRX53 influences cell elongation and susceptibility to Heterodera schachtii.

Authors:  Jing Jin; Tarek Hewezi; Thomas J Baum
Journal:  Plant Signal Behav       Date:  2011-11

8.  Cloning and molecular characterization of the basic peroxidase isoenzyme from Zinnia elegans, an enzyme involved in lignin biosynthesis.

Authors:  Carlos Gabaldón; Matías López-Serrano; María A Pedreño; A Ros Barceló
Journal:  Plant Physiol       Date:  2005-10-28       Impact factor: 8.340

9.  Specific peroxidases differentiate Brachypodium distachyon accessions and are associated with drought tolerance traits.

Authors:  Na Luo; Xiaoqing Yu; Gang Nie; Jianxiu Liu; Yiwei Jiang
Journal:  Ann Bot       Date:  2016-06-20       Impact factor: 4.357

10.  The genome of the thermoacidophilic red microalga Galdieria sulphuraria encodes a small family of secreted class III peroxidases that might be involved in cell wall modification.

Authors:  C Oesterhelt; S Vogelbein; R P Shrestha; M Stanke; A P M Weber
Journal:  Planta       Date:  2007-09-25       Impact factor: 4.116

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