Literature DB >> 14701906

H-bonded N-heterocyclic base-pair phototautomerizational potential barrier and mechanism: The 7-azaindole dimer.

J Catalán1, P Pérez, J C del Valle, J L G de Paz, M Kasha.   

Abstract

A theoretical analysis of the double proton transfer (PT) in a hydrogen-bonded N-heterocyclic base pair is presented. The calculated (time-dependent density functional theory) double PT barrier calculated for the concerted process of the 7-azaindole C(2h) dimer in the first excited singlet electronic state S(1) conforms well to the kinetic data and the photophysical evidence reported in this article. The calculated PT energy barrier of 4.8 kcal/mol height, and the corresponding zero point energy value, yield for the S(1) state an activation energy barrier of 0.3 kcal/mol. This finding implies that the double PT concerted process is almost barrierless, confirming previous experiments. Upon N-H deuteration of the 7-azaindole dimer, the theoretical excited-state activation energy for the double deuterium transfer is determined to be 1.4 kcal/mol, in agreement with experiment, which in low-temperature spectroscopy is shown to negate excited-state double-deuteron transfer.

Entities:  

Year:  2003        PMID: 14701906      PMCID: PMC327162          DOI: 10.1073/pnas.0306721101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  11 in total

1.  Resolution of concerted versus sequential mechanisms in photo-induced double-proton transfer reaction in 7-azaindole H-bonded dimer.

Authors:  J Catalán; M Kasha
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

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Authors:  J D WATSON; F H CRICK
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Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

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Authors:  C al-Taylor; M Ashraf el-Bayoumi; M Kasha
Journal:  Proc Natl Acad Sci U S A       Date:  1969-06       Impact factor: 11.205

6.  Photoinduced double proton transfer in a model hydrogen bonded base pair. Theoretical study.

Authors:  J Catalán; P Pérez
Journal:  J Theor Biol       Date:  1979-11-21       Impact factor: 2.691

7.  Spectrothermodynamic relationship of cationic vs anionic species derived from protonation vs deprotonation of pyrrolo-aza-aromatic bases in homologous series.

Authors:  J Catalán
Journal:  J Am Chem Soc       Date:  2001-12-05       Impact factor: 15.419

8.  The concerted mechanism of photo-induced biprotonic transfer in 7-azaindole dimers: structure, quantum-theoretical analysis, and simultaneity principles.

Authors:  Javier Catalán; Pilar Pérez; Juan Carlos del Valle; J L G de Paz; Michael Kasha
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-30       Impact factor: 11.205

9.  The concerted mechanism of photo-induced biprotonic transfer in 7-azaindole dimers: a model for the secondary evolution of the classic C2h dimer and comparison of four mechanisms.

Authors:  Javier Catalán; Pilar Pérez; Juan Carlos del Valle; J L G de Paz; Michael Kasha
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-30       Impact factor: 11.205

10.  Femtosecond molecular dynamics of tautomerization in model base pairs.

Authors:  A Douhal; S K Kim; A H Zewail
Journal:  Nature       Date:  1995-11-16       Impact factor: 49.962

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  3 in total

1.  The answer to concerted versus step-wise controversy for the double proton transfer mechanism of 7-azaindole dimer in solution.

Authors:  Satoshi Takeuchi; Tahei Tahara
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-20       Impact factor: 11.205

2.  Theoretical investigation on the water-assisted excited-state proton transfer of 7-azaindole derivatives: substituent effect.

Authors:  Jiacheng Yi; Hua Fang
Journal:  J Mol Model       Date:  2017-10-14       Impact factor: 1.810

3.  Stepwise double excited-state proton transfer is not possible in 7-azaindole dimer.

Authors:  Rachel Crespo-Otero; Nawee Kungwan; Mario Barbatti
Journal:  Chem Sci       Date:  2015-07-08       Impact factor: 9.825

  3 in total

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