Literature DB >> 14697795

Saturation-transfer difference NMR studies for the epitope mapping of a carbohydrate-mimetic peptide recognized by an anti-carbohydrate antibody.

Margaret A Johnson1, B Mario Pinto.   

Abstract

Saturation-transfer difference NMR spectroscopy (STD-NMR) experiments have been performed to analyze the topography or epitope of the octapeptide MDWNMHAA recognized by the anti-carbohydrate antibody SYA/J6 in solution; the antibody is directed against the Shigella flexneri Y O-antigen polysaccharide. The results permit a valuable comparison of solution versus crystal-structure data, and provide insight for the design of the next-generation binding ligands.

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Year:  2004        PMID: 14697795     DOI: 10.1016/j.bmc.2003.09.041

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  5 in total

1.  Applying Pose Clustering and MD Simulations To Eliminate False Positives in Molecular Docking.

Authors:  Spandana Makeneni; David F Thieker; Robert J Woods
Journal:  J Chem Inf Model       Date:  2018-03-09       Impact factor: 4.956

2.  Conformational Changes in Tyrosine 11 of Neurotensin Are Required to Activate the Neurotensin Receptor 1.

Authors:  Fabian Bumbak; Trayder Thomas; Billy J Noonan-Williams; Tasneem M Vaid; Fei Yan; Alice R Whitehead; Shoni Bruell; Martina Kocan; Xuan Tan; Margaret A Johnson; Ross A D Bathgate; David K Chalmers; Paul R Gooley; Daniel J Scott
Journal:  ACS Pharmacol Transl Sci       Date:  2020-04-29

3.  Studies of a murine monoclonal antibody directed against DARC: reappraisal of its specificity.

Authors:  Dorota Smolarek; Claude Hattab; Anna Buczkowska; Radoslaw Kaczmarek; Anna Jarząb; Sylvie Cochet; Alexandre G de Brevern; Jolanta Lukasiewicz; Wojciech Jachymek; Tomasz Niedziela; Magdalena Grodecka; Kazimiera Wasniowska; Yves Colin Aronovicz; Olivier Bertrand; Marcin Czerwinski
Journal:  PLoS One       Date:  2015-02-23       Impact factor: 3.240

Review 4.  Structural glycobiology: a game of snakes and ladders.

Authors:  Mari L DeMarco; Robert J Woods
Journal:  Glycobiology       Date:  2008-04-04       Impact factor: 4.313

Review 5.  Epitope mapping: the first step in developing epitope-based vaccines.

Authors:  Jonathan M Gershoni; Anna Roitburd-Berman; Dror D Siman-Tov; Natalia Tarnovitski Freund; Yael Weiss
Journal:  BioDrugs       Date:  2007       Impact factor: 5.807

  5 in total

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