Literature DB >> 14697508

Cloning, sequencing, and biochemical characterization of the nostocyclopeptide biosynthetic gene cluster: molecular basis for imine macrocyclization.

Julia E Becker1, Richard E Moore, Bradley S Moore.   

Abstract

Nostocyclopeptides A1 and A2 are novel cyclic heptapeptides produced by the terrestrial cyanobacterium Nostoc sp. ATCC53789 that possess a unique imino linkage in the macrocyclic ring. Herein we report the cloning, sequencing, annotation, and biochemical analysis of the 33-kb nostocyclopeptide (ncp) biosynthetic gene cluster, which includes seven open reading frames predicted to be involved in the biosynthesis and transport of these natural products. The genetic architecture and domain organization of the ncpA-B nonribosomal peptide synthetase (NRPS) is co-linear in arrangement with respect to the putative order of the biosynthetic assembly of the cyclic peptide. A reductase domain identified at the C-terminal end of the NRPS NcpB is predicted to catalyze an NAD(P)H-mediated hydride transfer to the heptapeptidyl-S-enzyme intermediate NH(2)-Tyr-Gly-DGln-Ile-Ser-mPro-Leu/Phe-S-NRPS to yield a linear heptapeptide aldehyde that is subsequently captured intramolecularly with the amino group of the N-terminal amino acid residue tyrosine to form a stable imine bond. While a few C-terminal reductases associated with NRPSs have been identified, the ncp reductase is the first to mediate imine macrocyclization involving peptide N- and C-termini. Biochemical analysis of the NcpA1 and NcpB1 adenylation domains coupled with the recent characterization of the (2S,4S)-5-hydroxyleucine dehydrogenase NcpD, which is involved in the biosynthesis of the nonproteinogenic amino acid residue L-4-methylproline from L-leucine, support the involvement of this cluster in nostocyclopeptide biosynthesis.

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Year:  2004        PMID: 14697508     DOI: 10.1016/j.gene.2003.09.034

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  30 in total

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2.  Comparison of cyanopeptolin genes in Planktothrix, Microcystis, and Anabaena strains: evidence for independent evolution within each genus.

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Journal:  Appl Environ Microbiol       Date:  2007-10-05       Impact factor: 4.792

Review 3.  Oxidative Cyclization in Natural Product Biosynthesis.

Authors:  Man-Cheng Tang; Yi Zou; Kenji Watanabe; Christopher T Walsh; Yi Tang
Journal:  Chem Rev       Date:  2016-12-12       Impact factor: 60.622

4.  Biosynthetic Cyclization Catalysts for the Assembly of Peptide and Polyketide Natural Products.

Authors:  Maria L Adrover-Castellano; Jennifer J Schmidt; David H Sherman
Journal:  ChemCatChem       Date:  2021-01-28       Impact factor: 5.686

5.  Identification and characterization of the echinocandin B biosynthetic gene cluster from Emericella rugulosa NRRL 11440.

Authors:  Ralph A Cacho; Wei Jiang; Yit-Heng Chooi; Christopher T Walsh; Yi Tang
Journal:  J Am Chem Soc       Date:  2012-10-01       Impact factor: 15.419

6.  Iminoboronate-Based Peptide Cyclization That Responds to pH, Oxidation, and Small Molecule Modulators.

Authors:  Anupam Bandyopadhyay; Jianmin Gao
Journal:  J Am Chem Soc       Date:  2016-02-12       Impact factor: 15.419

Review 7.  Natural products from thioester reductase containing biosynthetic pathways.

Authors:  Michael W Mullowney; Ryan A McClure; Matthew T Robey; Neil L Kelleher; Regan J Thomson
Journal:  Nat Prod Rep       Date:  2018-09-19       Impact factor: 13.423

8.  EcdGHK are three tailoring iron oxygenases for amino acid building blocks of the echinocandin scaffold.

Authors:  Wei Jiang; Ralph A Cacho; Grace Chiou; Neil K Garg; Yi Tang; Christopher T Walsh
Journal:  J Am Chem Soc       Date:  2013-03-11       Impact factor: 15.419

9.  Plasticity and evolution of aeruginosin biosynthesis in cyanobacteria.

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Journal:  Appl Environ Microbiol       Date:  2009-02-05       Impact factor: 4.792

10.  Automated genome mining for natural products.

Authors:  Michael H T Li; Peter M U Ung; James Zajkowski; Sylvie Garneau-Tsodikova; David H Sherman
Journal:  BMC Bioinformatics       Date:  2009-06-16       Impact factor: 3.169

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