Literature DB >> 14688251

A glutamate is the essential proton transfer gate during the catalytic cycle of the [NiFe] hydrogenase.

Sébastien Dementin1, Bénédicte Burlat, Antonio L De Lacey, Alejandro Pardo, Géraldine Adryanczyk-Perrier, Bruno Guigliarelli, Victor M Fernandez, Marc Rousset.   

Abstract

Kinetic, EPR, and Fourier transform infrared spectroscopic analysis of Desulfovibrio fructosovorans [NiFe] hydrogenase mutants targeted to Glu-25 indicated that this amino acid participates in proton transfer between the active site and the protein surface during the catalytic cycle. Replacement of that glutamic residue by a glutamine did not modify the spectroscopic properties of the enzyme but cancelled the catalytic activity except the para-H(2)/ortho-H(2) conversion. This mutation impaired the fast proton transfer from the active site that allows high turnover numbers for the oxidation of hydrogen. Replacement of the glutamic residue by the shorter aspartic acid slowed down this proton transfer, causing a significant decrease of H(2) oxidation and hydrogen isotope exchange activities, but did not change the para-H(2)/ortho-H(2) conversion activity. The spectroscopic properties of this mutant were totally different, especially in the reduced state in which a non-photosensitive nickel EPR spectrum was obtained.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 14688251     DOI: 10.1074/jbc.M312716200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  30 in total

1.  Structural basis for a [4Fe-3S] cluster in the oxygen-tolerant membrane-bound [NiFe]-hydrogenase.

Authors:  Yasuhito Shomura; Ki-Seok Yoon; Hirofumi Nishihara; Yoshiki Higuchi
Journal:  Nature       Date:  2011-10-16       Impact factor: 49.962

2.  Structural features of [NiFeSe] and [NiFe] hydrogenases determining their different properties: a computational approach.

Authors:  Carla S A Baltazar; Vitor H Teixeira; Cláudio M Soares
Journal:  J Biol Inorg Chem       Date:  2012-04       Impact factor: 3.358

3.  A threonine stabilizes the NiC and NiR catalytic intermediates of [NiFe]-hydrogenase.

Authors:  Abbas Abou-Hamdan; Pierre Ceccaldi; Hugo Lebrette; Oscar Gutiérrez-Sanz; Pierre Richaud; Laurent Cournac; Bruno Guigliarelli; Antonio L De Lacey; Christophe Léger; Anne Volbeda; Bénédicte Burlat; Sébastien Dementin
Journal:  J Biol Chem       Date:  2015-02-09       Impact factor: 5.157

4.  Experimental approaches to kinetics of gas diffusion in hydrogenase.

Authors:  Fanny Leroux; Sébastien Dementin; Bénédicte Burlat; Laurent Cournac; Anne Volbeda; Stéphanie Champ; Lydie Martin; Bruno Guigliarelli; Patrick Bertrand; Juan Fontecilla-Camps; Marc Rousset; Christophe Léger
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-06       Impact factor: 11.205

5.  Mechanism of proton transfer in [FeFe]-hydrogenase from Clostridium pasteurianum.

Authors:  Adam J Cornish; Katrin Gärtner; Hui Yang; John W Peters; Eric L Hegg
Journal:  J Biol Chem       Date:  2011-09-07       Impact factor: 5.157

6.  The direct role of selenocysteine in [NiFeSe] hydrogenase maturation and catalysis.

Authors:  Marta C Marques; Cristina Tapia; Oscar Gutiérrez-Sanz; Ana Raquel Ramos; Kimberly L Keller; Judy D Wall; Antonio L De Lacey; Pedro M Matias; Inês A C Pereira
Journal:  Nat Chem Biol       Date:  2017-03-20       Impact factor: 15.040

7.  Pathways of H2 toward the active site of [NiFe]-hydrogenase.

Authors:  Vitor H Teixeira; António M Baptista; Cláudio M Soares
Journal:  Biophys J       Date:  2006-05-26       Impact factor: 4.033

8.  Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states.

Authors:  Anne Volbeda; Lydie Martin; Elodie Barbier; Oscar Gutiérrez-Sanz; Antonio L De Lacey; Pierre-Pol Liebgott; Sébastien Dementin; Marc Rousset; Juan C Fontecilla-Camps
Journal:  J Biol Inorg Chem       Date:  2014-10-15       Impact factor: 3.358

9.  Structure of an Ancient Respiratory System.

Authors:  Hongjun Yu; Chang-Hao Wu; Gerrit J Schut; Dominik K Haja; Gongpu Zhao; John W Peters; Michael W W Adams; Huilin Li
Journal:  Cell       Date:  2018-05-10       Impact factor: 41.582

10.  Relating diffusion along the substrate tunnel and oxygen sensitivity in hydrogenase.

Authors:  Pierre-Pol Liebgott; Fanny Leroux; Bénédicte Burlat; Sébastien Dementin; Carole Baffert; Thomas Lautier; Vincent Fourmond; Pierre Ceccaldi; Christine Cavazza; Isabelle Meynial-Salles; Philippe Soucaille; Juan Carlos Fontecilla-Camps; Bruno Guigliarelli; Patrick Bertrand; Marc Rousset; Christophe Léger
Journal:  Nat Chem Biol       Date:  2009-12-06       Impact factor: 15.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.