Literature DB >> 14684902

Crystallization and preliminary X-ray analysis of 5'-methylthioribose kinase from Bacillus subtilis and Arabidopsis thaliana.

Shao Yang Ku1, Patrick Yip, Kenneth A Cornell, Michael K Riscoe, P Lynne Howell.   

Abstract

Recombinant Bacillus subtilis 5'-methylthioribose (MTR) kinase has been expressed, purified and subsequently crystallized using the hanging-drop vapor-diffusion technique. With PEG 2000MME as the precipitant, two different crystal forms have been grown in the absence and presence of the detergent CHAPS. These crystals belong to space groups P2(1)2(1)2(1) (unit-cell parameters a = 193.7, b = 83.2, c = 51.6 A) and P2(1)2(1)2 (unit-cell parameters a = 213.8, b = 83.2, c = 51.5 A), respectively. The crystals grown in the presence of CHAPS diffract to 2.2 A resolution at Station X8C, National Synchrotron Light Source (NSLS). For both crystal forms, the presence of two monomers per asymmetric unit is predicted (Matthews coefficient V(M) = 2.29 and 2.52 A(3) Da(-1), respectively). Recombinant C-terminally histidine-tagged Arabidopsis thaliana MTR kinase has also been expressed, purified and refolded into its active form. Rod-shaped crystals of this protein were grown from PEG 8000 using the hanging-drop vapor-diffusion technique. These crystals exhibit the symmetry of space group C2 (unit-cell parameters a = 162.3, b = 83.3, c = 91.0 A, beta = 117.8 degrees ) and diffract to 1.9 A resolution at Station X8C, NSLS. Two monomers are estimated to be present in the asymmetric unit (V(M) = 2.82 A(3) Da(-1)).

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 14684902     DOI: 10.1107/s0907444903022042

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

1.  Functional analysis of methylthioribose kinase genes in plants.

Authors:  Margret Sauter; Kenneth A Cornell; Sára Beszteri; Guillaume Rzewuski
Journal:  Plant Physiol       Date:  2004-11-19       Impact factor: 8.340

2.  A bifunctional salvage pathway for two distinct S-adenosylmethionine by-products that is widespread in bacteria, including pathogenic Escherichia coli.

Authors:  Justin A North; John A Wildenthal; Tobias J Erb; Bradley S Evans; Kathryn M Byerly; John A Gerlt; Fred R Tabita
Journal:  Mol Microbiol       Date:  2020-02-20       Impact factor: 3.501

3.  Structure of Arabidopsis thaliana 5-methylthioribose kinase reveals a more occluded active site than its bacterial homolog.

Authors:  Shao-Yang Ku; Kenneth A Cornell; P Lynne Howell
Journal:  BMC Struct Biol       Date:  2007-10-25

4.  MtnBD is a multifunctional fusion enzyme in the methionine salvage pathway of Tetrahymena thermophila.

Authors:  Toshihiro Nakano; Izuru Ohki; Akiho Yokota; Hiroki Ashida
Journal:  PLoS One       Date:  2013-07-01       Impact factor: 3.240

5.  Bacterial variations on the methionine salvage pathway.

Authors:  Agnieszka Sekowska; Valérie Dénervaud; Hiroki Ashida; Karine Michoud; Dieter Haas; Akiho Yokota; Antoine Danchin
Journal:  BMC Microbiol       Date:  2004-03-04       Impact factor: 3.605

6.  Salvage of the 5-deoxyribose byproduct of radical SAM enzymes.

Authors:  Guillaume A W Beaudoin; Qiang Li; Jacob Folz; Oliver Fiehn; Justin L Goodsell; Alexander Angerhofer; Steven D Bruner; Andrew D Hanson
Journal:  Nat Commun       Date:  2018-08-06       Impact factor: 14.919

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.