Literature DB >> 14683723

Real-time independent component analysis of fMRI time-series.

Fabrizio Esposito1, Erich Seifritz, Elia Formisano, Renato Morrone, Tommaso Scarabino, Gioacchino Tedeschi, Sossio Cirillo, Rainer Goebel, Francesco Di Salle.   

Abstract

Real-time functional magnetic resonance imaging (fMRI) enables one to monitor a subject's brain activity during an ongoing session. The availability of online information about brain activity is essential for developing and refining interactive fMRI paradigms in research and clinical trials and for neurofeedback applications. Data analysis for real-time fMRI has traditionally been based on hypothesis-driven processing methods. Off-line data analysis, conversely, may be usefully complemented by data-driven approaches, such as independent component analysis (ICA), which can identify brain activity without a priori temporal assumptions on brain activity. However, ICA is commonly considered a time-consuming procedure and thus unsuitable to process the high flux of fMRI data while they are acquired. Here, by specific choices regarding the implementation, we exported the ICA framework and implemented it into real-time fMRI data analysis. We show that, reducing the ICA input to a few points within a time-series in a sliding-window approach, computational times become compatible with real-time settings. Our technique produced accurate dynamic readouts of brain activity as well as a precise spatiotemporal history of quasistationary patterns in the form of cumulative activation maps and time courses. Results from real and simulated motor activation data show comparable performances for the proposed ICA implementation and standard linear regression analysis applied either in a sliding-window or in a cumulative mode. Furthermore, we demonstrate the possibility of monitoring transient or unexpected neural activities and suggest that real-time ICA may provide the fMRI researcher with a better understanding and control of subjects' behaviors and performances.

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Year:  2003        PMID: 14683723     DOI: 10.1016/j.neuroimage.2003.08.012

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  30 in total

1.  How does spatial extent of fMRI datasets affect independent component analysis decomposition?

Authors:  Adriana Aragri; Tommaso Scarabino; Erich Seifritz; Silvia Comani; Sossio Cirillo; Gioacchino Tedeschi; Fabrizio Esposito; Francesco Di Salle
Journal:  Hum Brain Mapp       Date:  2006-09       Impact factor: 5.038

2.  Atlas-based multichannel monitoring of functional MRI signals in real-time: automated approach.

Authors:  Jong-Hwan Lee; Heather M O'Leary; Hyunwook Park; Ferenc A Jolesz; Seung-Schik Yoo
Journal:  Hum Brain Mapp       Date:  2008-02       Impact factor: 5.038

3.  Functional connectivity estimation in fMRI data: influence of preprocessing and time course selection.

Authors:  Maria Gavrilescu; Geoffrey W Stuart; Susan Rossell; Katherine Henshall; Colette McKay; Alex A Sergejew; David Copolov; Gary F Egan
Journal:  Hum Brain Mapp       Date:  2008-09       Impact factor: 5.038

4.  BAX: a toolbox for the dynamic analysis of functional MRI datasets.

Authors:  Epifanio Bagarinao; Kayako Matsuo; Toshiharu Nakai; Yoshio Tanaka
Journal:  Neuroinformatics       Date:  2008-05-09

5.  Imaging of temporomandibular joint: approach by direct volume rendering.

Authors:  Antonino Marco Cuccia; Carola Caradonna; Daniele Bruschetta; Gianluigi Vaccarino; Demetrio Milardi
Journal:  J Clin Diagn Res       Date:  2014-11-20

6.  Psychophysiological whole-brain network clustering based on connectivity dynamics analysis in naturalistic conditions.

Authors:  Gal Raz; Lavi Shpigelman; Yael Jacob; Tal Gonen; Yoav Benjamini; Talma Hendler
Journal:  Hum Brain Mapp       Date:  2016-08-01       Impact factor: 5.038

7.  Deletion of the mu opioid receptor gene in mice reshapes the reward-aversion connectome.

Authors:  Anna E Mechling; Tanzil Arefin; Hsu-Lei Lee; Thomas Bienert; Marco Reisert; Sami Ben Hamida; Emmanuel Darcq; Aliza Ehrlich; Claire Gaveriaux-Ruff; Maxime J Parent; Pedro Rosa-Neto; Jürgen Hennig; Dominik von Elverfeldt; Brigitte Lina Kieffer; Laura-Adela Harsan
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-26       Impact factor: 11.205

8.  Real time fMRI feedback of the anterior cingulate and posterior insular cortex in the processing of pain.

Authors:  Mariela Rance; Michaela Ruttorf; Frauke Nees; Lothar Rudi Schad; Herta Flor
Journal:  Hum Brain Mapp       Date:  2014-07-16       Impact factor: 5.038

9.  A graphics processing unit accelerated motion correction algorithm and modular system for real-time fMRI.

Authors:  Dustin Scheinost; Michelle Hampson; Maolin Qiu; Jitendra Bhawnani; R Todd Constable; Xenophon Papademetris
Journal:  Neuroinformatics       Date:  2013-07

10.  Linking functional and structural brain images with multivariate network analyses: a novel application of the partial least square method.

Authors:  Kewei Chen; Eric M Reiman; Zhongdan Huan; Richard J Caselli; Daniel Bandy; Napatkamon Ayutyanont; Gene E Alexander
Journal:  Neuroimage       Date:  2009-04-23       Impact factor: 6.556

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