Literature DB >> 14682823

Virus shapes and buckling transitions in spherical shells.

Jack Lidmar1, Leonid Mirny, David R Nelson.   

Abstract

We show that the icosahedral packings of protein capsomeres proposed by Caspar and Klug for spherical viruses become unstable to faceting for sufficiently large virus size, in analogy with the buckling instability of disclinations in two-dimensional crystals. Our model, based on the nonlinear physics of thin elastic shells, produces excellent one-parameter fits in real space to the full three-dimensional shape of large spherical viruses. The faceted shape depends only on the dimensionless Foppl-von Kármán number gamma=YR(2)/kappa, where Y is the two-dimensional Young's modulus of the protein shell, kappa is its bending rigidity, and R is the mean virus radius. The shape can be parametrized more quantitatively in terms of a spherical harmonic expansion. We also investigate elastic shell theory for extremely large gamma, 10(3)<gamma<10(8), and find results applicable to icosahedral shapes of large vesicles studied with freeze fracture and electron microscopy.

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Year:  2003        PMID: 14682823     DOI: 10.1103/PhysRevE.68.051910

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  84 in total

1.  Determination of viral capsid elastic properties from equilibrium thermal fluctuations.

Authors:  Eric R May; Charles L Brooks
Journal:  Phys Rev Lett       Date:  2011-05-02       Impact factor: 9.161

2.  On the morphology of viral capsids: elastic properties and buckling transitions.

Authors:  Eric R May; Charles L Brooks
Journal:  J Phys Chem B       Date:  2012-03-27       Impact factor: 2.991

3.  Exploring the symmetry and mechanism of virus capsid maturation via an ensemble of pathways.

Authors:  Eric R May; Jun Feng; Charles L Brooks
Journal:  Biophys J       Date:  2012-02-07       Impact factor: 4.033

4.  Numerical deflation of beach balls with various Poisson's ratios: from sphere to bowl's shape.

Authors:  C Quilliet
Journal:  Eur Phys J E Soft Matter       Date:  2012-06-19       Impact factor: 1.890

5.  Squeezing protein shells: how continuum elastic models, molecular dynamics simulations, and experiments coalesce at the nanoscale.

Authors:  W H Roos; M M Gibbons; A Arkhipov; C Uetrecht; N R Watts; P T Wingfield; A C Steven; A J R Heck; K Schulten; W S Klug; G J L Wuite
Journal:  Biophys J       Date:  2010-08-09       Impact factor: 4.033

6.  Foldable structures and the natural design of pollen grains.

Authors:  Eleni Katifori; Silas Alben; Enrique Cerda; David R Nelson; Jacques Dumais
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-19       Impact factor: 11.205

7.  Non-spherical shapes of capsules within a fourth-order curvature model.

Authors:  O V Manyuhina; J J Hetzel; M I Katsnelson; A Fasolino
Journal:  Eur Phys J E Soft Matter       Date:  2010-07-08       Impact factor: 1.890

8.  The Robust Assembly of Small Symmetric Nanoshells.

Authors:  Jef Wagner; Roya Zandi
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

9.  Volume regulation and shape bifurcation in the cell nucleus.

Authors:  Dong-Hwee Kim; Bo Li; Fangwei Si; Jude M Phillip; Denis Wirtz; Sean X Sun
Journal:  J Cell Sci       Date:  2015-08-04       Impact factor: 5.285

10.  Geometrically controlled snapping transitions in shells with curved creases.

Authors:  Nakul Prabhakar Bende; Arthur A Evans; Sarah Innes-Gold; Luis A Marin; Itai Cohen; Ryan C Hayward; Christian D Santangelo
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-20       Impact factor: 11.205

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