Literature DB >> 14675547

SET domains and histone methylation.

Bing Xiao1, Jonathan R Wilson, Steven J Gamblin.   

Abstract

The realisation that SET domains, which are found in numerous proteins involved in chromatin regulation, catalyse the methylation of lysine residues has led to intense interest in their cellular, biochemical and structural properties. The structures of five SET domain proteins have been reported over the past year. SET domains possess a novel fold, and use adjacent domains for both structural stabilisation and the completion of their active sites. The cofactor S-adenosyl-L-methionine and peptide substrates bind on opposite faces of the SET domain. Remarkably, the sidechain of the target lysine approaches the transferred methyl group through a narrow channel that passes through the middle of the domain.

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Year:  2003        PMID: 14675547     DOI: 10.1016/j.sbi.2003.10.003

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  58 in total

1.  A novel 3-methylhistidine modification of yeast ribosomal protein Rpl3 is dependent upon the YIL110W methyltransferase.

Authors:  Kristofor J Webb; Cecilia I Zurita-Lopez; Qais Al-Hadid; Arthur Laganowsky; Brian D Young; Rebecca S Lipson; Puneet Souda; Kym F Faull; Julian P Whitelegge; Steven G Clarke
Journal:  J Biol Chem       Date:  2010-09-23       Impact factor: 5.157

2.  Structural basis for histone H3 Lys 27 demethylation by UTX/KDM6A.

Authors:  Toru Sengoku; Shigeyuki Yokoyama
Journal:  Genes Dev       Date:  2011-10-14       Impact factor: 11.361

3.  Ab initio quantum mechanical/molecular mechanical molecular dynamics simulation of enzyme catalysis: the case of histone lysine methyltransferase SET7/9.

Authors:  Shenglong Wang; Po Hu; Yingkai Zhang
Journal:  J Phys Chem B       Date:  2007-03-22       Impact factor: 2.991

4.  Identification of three histone methyltransferases in Drosophila: dG9a is a suppressor of PEV and is required for gene silencing.

Authors:  Jacek Mis; Sarbjit S Ner; Thomas A Grigliatti
Journal:  Mol Genet Genomics       Date:  2006-04-19       Impact factor: 3.291

5.  Rubisco in complex with Rubisco large subunit methyltransferase.

Authors:  Stefan Raunser; Roberta Magnani; Zhong Huang; Robert L Houtz; Raymond C Trievel; Pawel A Penczek; Thomas Walz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-10       Impact factor: 11.205

Review 6.  The promise and failures of epigenetic therapies for cancer treatment.

Authors:  Pasano Bojang; Kenneth S Ramos
Journal:  Cancer Treat Rev       Date:  2013-07-05       Impact factor: 12.111

7.  An atypical 12q24.31 microdeletion implicates six genes including a histone demethylase KDM2B and a histone methyltransferase SETD1B in syndromic intellectual disability.

Authors:  Jonathan D J Labonne; Kang-Han Lee; Shigeki Iwase; Il-Keun Kong; Michael P Diamond; Lawrence C Layman; Cheol-Hee Kim; Hyung-Goo Kim
Journal:  Hum Genet       Date:  2016-04-22       Impact factor: 4.132

8.  Mapping metabolic and transcript temporal switches during germination in rice highlights specific transcription factors and the role of RNA instability in the germination process.

Authors:  Katharine A Howell; Reena Narsai; Adam Carroll; Aneta Ivanova; Marc Lohse; Björn Usadel; A Harvey Millar; James Whelan
Journal:  Plant Physiol       Date:  2008-12-12       Impact factor: 8.340

Review 9.  Menin, histone h3 methyltransferases, and regulation of cell proliferation: current knowledge and perspective.

Authors:  Xinjiang Wu; Xianxin Hua
Journal:  Curr Mol Med       Date:  2008-12       Impact factor: 2.222

10.  Identification of two SET domain proteins required for methylation of lysine residues in yeast ribosomal protein Rpl42ab.

Authors:  Kristofor J Webb; Arthur Laganowsky; Julian P Whitelegge; Steven G Clarke
Journal:  J Biol Chem       Date:  2008-10-28       Impact factor: 5.157

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