Literature DB >> 14673493

Apoptosis: a four-week laboratory investigation for advanced molecular and cellular biology students.

Susan M DiBartolomeis1, James P Moné.   

Abstract

Over the past decade, apoptosis has emerged as an important field of study central to ongoing research in many diverse fields, from developmental biology to cancer research. Apoptosis proceeds by a highly coordinated series of events that includes enzyme activation, DNA fragmentation, and alterations in plasma membrane permeability. The detection of each of these phenotypic changes is accessible to advanced undergraduate cell and molecular biology students. We describe a 4-week laboratory sequence that integrates cell culture, fluorescence microscopy, DNA isolation and analysis, and western blotting (immunoblotting) to follow apoptosis in cultured human cells. Students working in teams chemically induce apoptosis, and harvest, process, and analyze cells, using their data to determine the order of events during apoptosis. We, as instructors, expose the students to an environment closely simulating what they would encounter in an active cell or molecular biology research laboratory by having students coordinate and perform multiple tasks simultaneously and by having them experience experimental design using current literature, data interpretation, and analysis to answer a single question. Students are assessed by examination of laboratory notebooks for completeness of experimental protocols and analysis of results and for completion of an assignment that includes questions pertaining to data interpretation and apoptosis.

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Year:  2003        PMID: 14673493      PMCID: PMC256977          DOI: 10.1187/cbe.03-06-0027

Source DB:  PubMed          Journal:  Cell Biol Educ        ISSN: 1536-7509


  10 in total

Review 1.  The biochemistry of apoptosis.

Authors:  M O Hengartner
Journal:  Nature       Date:  2000-10-12       Impact factor: 49.962

Review 2.  Markers of apoptosis: methods for elucidating the mechanism of apoptotic cell death from the nervous system.

Authors:  Paul G Smyth; Stephen A Berman
Journal:  Biotechniques       Date:  2002-03       Impact factor: 1.993

Review 3.  Four deaths and a funeral: from caspases to alternative mechanisms.

Authors:  M Leist; M Jäättelä
Journal:  Nat Rev Mol Cell Biol       Date:  2001-08       Impact factor: 94.444

4.  Learning cell biology as a team: a project-based approach to upper-division cell biology.

Authors:  Robin Wright; James Boggs
Journal:  Cell Biol Educ       Date:  2002

5.  Using the two-hybrid screen in the classroom laboratory.

Authors:  Daniel P Odom; Martha J Grossel
Journal:  Cell Biol Educ       Date:  2002

6.  Cell biology. PARP-1--a perpetrator of apoptotic cell death?

Authors:  Alberto Chiarugi; Michael A Moskowitz
Journal:  Science       Date:  2002-07-12       Impact factor: 47.728

7.  Lineage-related susceptibility of human hemopoietic cell lines to apoptosis.

Authors:  A R Mariani; M Columbaro; G Zauli; L Zamai; F Luchetti; P Gobbi; D Ghibellini; E Falcieri; M Vitale
Journal:  Anat Rec       Date:  1999-01

Review 8.  Proteases for cell suicide: functions and regulation of caspases.

Authors:  H Y Chang; X Yang
Journal:  Microbiol Mol Biol Rev       Date:  2000-12       Impact factor: 11.056

9.  Activation of multiple interleukin-1beta converting enzyme homologues in cytosol and nuclei of HL-60 cells during etoposide-induced apoptosis.

Authors:  L M Martins; T Kottke; P W Mesner; G S Basi; S Sinha; N Frigon; E Tatar; J S Tung; K Bryant; A Takahashi; P A Svingen; B J Madden; D J McCormick; W C Earnshaw; S H Kaufmann
Journal:  J Biol Chem       Date:  1997-03-14       Impact factor: 5.157

10.  Caspase-3-dependent and caspase-3-independent pathways leading to chromatin DNA fragmentation in HL-60 cells.

Authors:  X W Meng; M J Fraser; J M Feller; J B Ziegler
Journal:  Apoptosis       Date:  2000-02       Impact factor: 4.677

  10 in total
  7 in total

1.  From organelle to protein gel: a 6-wk laboratory project on flagellar proteins.

Authors:  Beth Ferro Mitchell; Mary R Graziano
Journal:  CBE Life Sci Educ       Date:  2006       Impact factor: 3.325

2.  Isolation and characterization of Saccharomyces cerevisiae mutants defective in chromosome transmission in an undergraduate genetics research course.

Authors:  Heidi Major Sleister
Journal:  Genetics       Date:  2007-07-29       Impact factor: 4.562

3.  A semester-long project for teaching basic techniques in molecular biology such as restriction fragment length polymorphism analysis to undergraduate and graduate students.

Authors:  Susan M DiBartolomeis
Journal:  CBE Life Sci Educ       Date:  2011       Impact factor: 3.325

4.  Combined treatment with antioxidants and immunosuppressants on cytokine release by human peripheral blood mononuclear cells - chemically injured keratocyte reaction.

Authors:  Kayoung Yi; Tae Young Chung; Joon Young Hyon; Jae Woong Koh; Won Ryang Wee; Young Joo Shin
Journal:  Mol Vis       Date:  2011-10-15       Impact factor: 2.367

5.  A comprehensive faculty, staff, and student training program enhances student perceptions of a course-based research experience at a two-year institution.

Authors:  Thomas D Wolkow; Lisa T Durrenberger; Michael A Maynard; Kylie K Harrall; Lisa M Hines
Journal:  CBE Life Sci Educ       Date:  2014       Impact factor: 3.325

6.  Enhancing Scientific Literacy in the Undergraduate Cell Biology Laboratory Classroom.

Authors:  Hadiya Woodham; Gili Marbach-Ad; Gretchen Downey; Erika Tomei; Katerina Thompson
Journal:  J Microbiol Biol Educ       Date:  2016-12-02

7.  Morin Inhibits Proliferation of SW480 Colorectal Cancer Cells by Inducing Apoptosis Mediated by Reactive Oxygen Species Formation and Uncoupling of Warburg Effect.

Authors:  Thomas Sithara; K B Arun; H P Syama; T R Reshmitha; P Nisha
Journal:  Front Pharmacol       Date:  2017-09-12       Impact factor: 5.810

  7 in total

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