Literature DB >> 14668234

The MUSC DNA Microarray Database.

Gary L Argraves1, Jeremy L Barth, W Scott Argraves.   

Abstract

SUMMARY: The Medical University of South Carolina (MUSC) DNA Microarray Database is a web-accessible archive of DNA microarray data. The database was developed using the DNA microarray project/data management system, micro ArrayDB. Annotations for each DNA microarray project and associated cRNA target information are stored in a MySQL relational database and linked to array hybridization data (raw and normalized). At the discretion of investigators, data are placed into the public domain where they can be interrogated and downloaded through a web browser. In addition to serving as an online resource of gene expression data, the MUSC DNA Microarray Database is a model for other academic DNA microarray data repositories. AVAILABILITY: Browsing and downloading of MUSC DNA Microarray Database information can be done after registration at http://proteogenomics.musc.edu/pss/home.php.

Mesh:

Year:  2003        PMID: 14668234     DOI: 10.1093/bioinformatics/btg325

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  5 in total

1.  Genetic sphingosine kinase 1 deficiency significantly decreases synovial inflammation and joint erosions in murine TNF-alpha-induced arthritis.

Authors:  DeAnna A Baker; Jeremy Barth; Raymond Chang; Lina M Obeid; Gary S Gilkeson
Journal:  J Immunol       Date:  2010-07-19       Impact factor: 5.422

2.  Effects of spaceflight on murine skeletal muscle gene expression.

Authors:  David L Allen; Eric R Bandstra; Brooke C Harrison; Seiha Thorng; Louis S Stodieck; Paul J Kostenuik; Sean Morony; David L Lacey; Timothy G Hammond; Leslie L Leinwand; W Scott Argraves; Ted A Bateman; Jeremy L Barth
Journal:  J Appl Physiol (1985)       Date:  2008-12-12

Review 3.  Databases of free expression.

Authors:  John R Walker; Tim Wiltshire
Journal:  Mamm Genome       Date:  2006-12-01       Impact factor: 3.224

4.  ArrayQuest: a web resource for the analysis of DNA microarray data.

Authors:  Gary L Argraves; Saurin Jani; Jeremy L Barth; W Scott Argraves
Journal:  BMC Bioinformatics       Date:  2005-12-01       Impact factor: 3.169

5.  Web-based analysis of the mouse transcriptome using Genevestigator.

Authors:  Oliver Laule; Matthias Hirsch-Hoffmann; Tomas Hruz; Wilhelm Gruissem; Philip Zimmermann
Journal:  BMC Bioinformatics       Date:  2006-06-21       Impact factor: 3.169

  5 in total

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