Literature DB >> 14666

Studies of individual carbon sites of azurin from Pseudomonas aeruginosa by natural-abundance carbon-13 nuclear magnetic resonance spectroscopy.

K Ugurbil, R S Norton, A Allerhand, R Bersohn.   

Abstract

The environments of the aromatic residues (and of the single arginine residue) of azurin from Pseudomonas aeruginosa are investigated by means of natural-abundance 13C Fourier transform NMR spectroscopy. In the case of the diamagnetic Cu(I) azurin, all 17 nonprotonated aromatic carbons (and Czota of Arg-79) yield narrow resonances. Furthermore, a single-carbon amide carbonyl resonance with an unusual chemical shift (peak chi) is observed. The pH dependence of chemical shifts is used to identify the resonances of Cgamma of titrating histidines, and of Cgamma and Czota of the two tyrosines. The resonances of Cgamma and Cdelta2 of the single tryptophan residue (and Czota of Arg-79) are also identified. The pKa values of the two tyrosines are different from each other and higher than typical values of "solvent-exposed" tyrosine residues. Two of the four histidine residues do not titrate (in the pH range 4 to 11). The resonance of Cgamma of one histidine exhibits a pH titration with fast proton exchange behavior and a pKa of 7.5 +/- 0.2. The direction of the titration shift indicates that the imidazole form of this histidine is the Ndelta1-H tautomer. The Cgamma resonance of the other titrating histidine exhibits slow exchange behavior with a pKa of about 7. The imidazole form of this histidine is the Nepsilon2-H tautomer. When going to the paramagnetic Cu(II) protein, only 11 of the 19 carbons mentioned above yield resonances that are narrow enough to be detected. Also, some of the observed resonances exhibit significant paramagnetic broadening. A comparison of spectra of fully reduced azurin, mixtures of reduced and oxidized azurin, and fully oxidized azurin yields the following information. (i) Peak chi arises from an amide group that probably is coordinated to the copper. (ii) The two nontitrating histidine residues are probably copper ligands, with Ndelta1 coordinated to the metal. (iii) The side chains of Arg-79 and the two tyrosine residues are not coordinated to the copper, and Trp-48 is probably not a ligand either. (iv) The gamma carbons of Trp-48, the tyrosine with the lower pKa, the titrating histidine with slow exchange behavior, and three or four of the six phenylalanine residues are sufficiently close to the copper to undergo significant paramagnetic broadening in the spectrum of oxidized azurin.

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Year:  1977        PMID: 14666     DOI: 10.1021/bi00624a012

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  Characterization of the blue copper site in oxidized azurin by extended x-ray absorption fine structure: Determination of a short Cu-S distance.

Authors:  T D Tullius; P Frank; K O Hodgson
Journal:  Proc Natl Acad Sci U S A       Date:  1978-09       Impact factor: 11.205

2.  Photogeneration and Quenching of Tryptophan Radical in Azurin.

Authors:  Bethany C Larson; Jennifer R Pomponio; Hannah S Shafaat; Rachel H Kim; Brian S Leigh; Michael J Tauber; Judy E Kim
Journal:  J Phys Chem B       Date:  2015-02-17       Impact factor: 2.991

Review 3.  Plastocyanin: structural and functional analysis.

Authors:  M R Redinbo; T O Yeates; S Merchant
Journal:  J Bioenerg Biomembr       Date:  1994-02       Impact factor: 2.945

4.  Activation of electron transfer reactions of the blue proteins.

Authors:  A S Brill
Journal:  Biophys J       Date:  1978-04       Impact factor: 4.033

5.  1H NMR studies of electron exchange rate of Pseudomonas aeruginosa azurin.

Authors:  K Uğurbil; S Mitra
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

6.  The accessibility of type I Cu(II) centers in laccase, azurin, and stellacyanin to exchangeable hydrogen and ambient water.

Authors:  W B Mims; J L Davis; J Peisach
Journal:  Biophys J       Date:  1984-04       Impact factor: 4.033

7.  Normal coordinate analysis of the copper center of azurin and the assignment of its resonance Raman spectrum.

Authors:  T J Thamann; P Frank; L J Willis; T M Loehr
Journal:  Proc Natl Acad Sci U S A       Date:  1982-10       Impact factor: 11.205

8.  Stellacyanin. Studies of the metal-binding site using x-ray absorption spectroscopy.

Authors:  J Peisach; L Powers; W E Blumberg; B Chance
Journal:  Biophys J       Date:  1982-06       Impact factor: 4.033

9.  Conformational heterogeneity of the copper binding site in azurin. A time-resolved fluorescence study.

Authors:  A G Szabo; T M Stepanik; D M Wayner; N M Young
Journal:  Biophys J       Date:  1983-03       Impact factor: 4.033

  9 in total

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