Literature DB >> 14659757

A conserved arginine plays a role in the catalytic cycle of the protein disulphide isomerases.

A K Lappi1, M F Lensink, H I Alanen, K E H Salo, M Lobell, A H Juffer, L W Ruddock.   

Abstract

The pK(a) values of the CXXC active-site cysteine residues play a critical role in determining the physiological function of the thioredoxin superfamily. To act as an efficient thiol-disulphide oxidant the thiolate state of the N-terminal cysteine must be stabilised and the thiolate state of the C-terminal cysteine residue destabilised. While increasing the pK(a) value of the C-terminal cysteine residue promotes oxidation of substrates, it has an inhibitory effect on the reoxidation of the enzyme, which is promoted by the formation of a thiolate at this position. Since reoxidation is essential to complete the catalytic cycle, the differential requirement for a high and a low pK(a) value for the C-terminal cysteine residue for different steps in the reaction presents us with a paradox. Here, we report the identification of a conserved arginine residue, located in the loop between beta5 and alpha4 of the catalytic domains of the human protein disulphide isomerase (PDI) family, which is critical for the catalytic function of PDI, ERp57, ERp72 and P5, specifically for reoxidation. An examination of the published NMR structure for the a domain of PDI combined with molecular dynamic studies suggest that the side-chain of this arginine residue moves into and out of the active-site locale and that this has a very marked effect on the pK(a) value of the active-site cysteine residues. This intra-domain motion resolves the apparent dichotomy of the pK(a) requirements for the C-terminal active-site cysteine.

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Year:  2004        PMID: 14659757     DOI: 10.1016/j.jmb.2003.10.051

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  30 in total

1.  Prediction of pKa and redox properties in the thioredoxin superfamily.

Authors:  Efrosini Moutevelis; Jim Warwicker
Journal:  Protein Sci       Date:  2004-08-31       Impact factor: 6.725

2.  ALS-linked protein disulfide isomerase variants cause motor dysfunction.

Authors:  Ute Woehlbier; Alicia Colombo; Mirva J Saaranen; Viviana Pérez; Jorge Ojeda; Fernando J Bustos; Catherine I Andreu; Mauricio Torres; Vicente Valenzuela; Danilo B Medinas; Pablo Rozas; Rene L Vidal; Rodrigo Lopez-Gonzalez; Johnny Salameh; Sara Fernandez-Collemann; Natalia Muñoz; Soledad Matus; Ricardo Armisen; Alfredo Sagredo; Karina Palma; Thergiory Irrazabal; Sandra Almeida; Paloma Gonzalez-Perez; Mario Campero; Fen-Biao Gao; Pablo Henny; Brigitte van Zundert; Lloyd W Ruddock; Miguel L Concha; Juan P Henriquez; Robert H Brown; Claudio Hetz
Journal:  EMBO J       Date:  2016-02-11       Impact factor: 11.598

Review 3.  From structure to redox: The diverse functional roles of disulfides and implications in disease.

Authors:  Tyler J Bechtel; Eranthie Weerapana
Journal:  Proteomics       Date:  2017-03       Impact factor: 3.984

Review 4.  Multiple catalytically active thioredoxin folds: a winning strategy for many functions.

Authors:  Emilia Pedone; Danila Limauro; Katia D'Ambrosio; Giuseppina De Simone; Simonetta Bartolucci
Journal:  Cell Mol Life Sci       Date:  2010-07-13       Impact factor: 9.261

Review 5.  The MOD-QM/MM Method: Applications to Studies of Photosystem II and DNA G-Quadruplexes.

Authors:  M Askerka; J Ho; E R Batista; J A Gascón; V S Batista
Journal:  Methods Enzymol       Date:  2016-07-15       Impact factor: 1.600

6.  Catalysis of protein disulfide bond isomerization in a homogeneous substrate.

Authors:  Elizabeth A Kersteen; Seth R Barrows; Ronald T Raines
Journal:  Biochemistry       Date:  2005-09-13       Impact factor: 3.162

7.  Structure of the third catalytic domain of the protein disulfide isomerase ERp46.

Authors:  Irina E Gulerez; Guennadi Kozlov; Angelika Rosenauer; Kalle Gehring
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-03-27

8.  Mutational alterations of the key cis proline residue that cause accumulation of enzymatic reaction intermediates of DsbA, a member of the thioredoxin superfamily.

Authors:  Hiroshi Kadokura; Lorenzo Nichols; Jon Beckwith
Journal:  J Bacteriol       Date:  2005-02       Impact factor: 3.490

9.  Plasticity of human protein disulfide isomerase: evidence for mobility around the X-linker region and its functional significance.

Authors:  Chao Wang; Sihong Chen; Xi Wang; Lei Wang; A Katrine Wallis; Robert B Freedman; Chih-chen Wang
Journal:  J Biol Chem       Date:  2010-06-01       Impact factor: 5.157

10.  Functional relationship between protein disulfide isomerase family members during the oxidative folding of human secretory proteins.

Authors:  Lori A Rutkevich; Myrna F Cohen-Doyle; Ulf Brockmeier; David B Williams
Journal:  Mol Biol Cell       Date:  2010-07-21       Impact factor: 4.138

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