Literature DB >> 14659702

Why are there so many carbohydrate-active enzyme-related genes in plants?

Pedro M Coutinho1, Mark Stam, Eric Blanc, Bernard Henrissat.   

Abstract

Plants contain far more carbohydrate-active enzyme-encoding genes than any other organism sequenced to date. The extremely large number of glycosidase and glycosyltransferase-related genes in plant genomes can be explained by the complex structure of the plant cell wall, by ancient genome duplication and by recent local duplications, but also by the recent emergence of novel and unrelated protein functions based on widely available pre-existing scaffolds.

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Year:  2003        PMID： 14659702     DOI： 10.1016/j.tplants.2003.10.002

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN： 1360-1385            Impact factor:   18.313


  42 in total

Review 1.  Arabinogalactan-proteins: key regulators at the cell surface?

Authors:  Miriam Ellis; Jack Egelund; Carolyn J Schultz; Antony Bacic
Journal:  Plant Physiol       Date:  2010-04-13       Impact factor: 8.340

2.  The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides.

Authors:  Alexander J Mann; Richard L Hahnke; Sixing Huang; Johannes Werner; Peng Xing; Tristan Barbeyron; Bruno Huettel; Kurt Stüber; Richard Reinhardt; Jens Harder; Frank Oliver Glöckner; Rudolf I Amann; Hanno Teeling
Journal:  Appl Environ Microbiol       Date:  2013-08-30       Impact factor: 4.792

3.  Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics.

Authors:  David M Brown; Leo A H Zeef; Joanne Ellis; Royston Goodacre; Simon R Turner
Journal:  Plant Cell       Date:  2005-06-24       Impact factor: 11.277

Review 4.  Genomics of plant cell wall biogenesis.

Authors:  Weidong Yong; Bruce Link; Ronan O'Malley; Jagdish Tewari; Charles T Hunter; Chung-An Lu; Xuemei Li; Anthony B Bleecker; Karen E Koch; Maureen C McCann; Donald R McCarty; Sara E Patterson; Wolf-Dieter Reiter; Chris Staiger; Steven R Thomas; Wilfred Vermerris; Nicholas C Carpita
Journal:  Planta       Date:  2005-06-25       Impact factor: 4.116

5.  Complete cellulase system in the marine bacterium Saccharophagus degradans strain 2-40T.

Authors:  Larry E Taylor; Bernard Henrissat; Pedro M Coutinho; Nathan A Ekborg; Steven W Hutcheson; Ronald M Weiner
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

6.  Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana.

Authors:  Romain Louvet; Emilie Cavel; Laurent Gutierrez; Stéphanie Guénin; David Roger; Françoise Gillet; François Guerineau; Jérôme Pelloux
Journal:  Planta       Date:  2006-04-19       Impact factor: 4.116

7.  Crystallization and preliminary crystallographic analysis of endo-1,3-beta-glucanase from alkaliphilic Nocardiopsis sp. strain F96.

Authors:  Guntur Fibriansah; Sumiko Masuda; Raita Hirose; Kensaku Hamada; Nobuo Tanaka; Satoshi Nakamura; Takashi Kumasaka
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-12-16

8.  Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.

Authors:  Naomi L Ward; Jean F Challacombe; Peter H Janssen; Bernard Henrissat; Pedro M Coutinho; Martin Wu; Gary Xie; Daniel H Haft; Michelle Sait; Jonathan Badger; Ravi D Barabote; Brent Bradley; Thomas S Brettin; Lauren M Brinkac; David Bruce; Todd Creasy; Sean C Daugherty; Tanja M Davidsen; Robert T DeBoy; J Chris Detter; Robert J Dodson; A Scott Durkin; Anuradha Ganapathy; Michelle Gwinn-Giglio; Cliff S Han; Hoda Khouri; Hajnalka Kiss; Sagar P Kothari; Ramana Madupu; Karen E Nelson; William C Nelson; Ian Paulsen; Kevin Penn; Qinghu Ren; M J Rosovitz; Jeremy D Selengut; Susmita Shrivastava; Steven A Sullivan; Roxanne Tapia; L Sue Thompson; Kisha L Watkins; Qi Yang; Chunhui Yu; Nikhat Zafar; Liwei Zhou; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2009-02-05       Impact factor: 4.792

9.  Poplar carbohydrate-active enzymes. Gene identification and expression analyses.

Authors:  Jane Geisler-Lee; Matt Geisler; Pedro M Coutinho; Bo Segerman; Nobuyuki Nishikubo; Junko Takahashi; Henrik Aspeborg; Soraya Djerbi; Emma Master; Sara Andersson-Gunnerås; Björn Sundberg; Stanislaw Karpinski; Tuula T Teeri; Leszek A Kleczkowski; Bernard Henrissat; Ewa J Mellerowicz
Journal:  Plant Physiol       Date:  2006-01-13       Impact factor: 8.340

10.  Novel rhamnogalacturonan I and arabinoxylan polysaccharides of flax seed mucilage.

Authors:  Radnaa Naran; Guibing Chen; Nicholas C Carpita
Journal:  Plant Physiol       Date:  2008-07-30       Impact factor: 8.340
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