Literature DB >> 14659407

Dystrophinopathy caused by mid-intronic substitutions activating cryptic exons in the DMD gene.

Christophe Béroud1, Alain Carrié, Chérif Beldjord, Nathalie Deburgrave, Stéphane Llense, Nadège Carelle, Cécile Peccate, Jean Marie Cuisset, Florence Pandit, Frédérique Carré-Pigeon, Michèle Mayer, Rémi Bellance, Dominique Récan, Jamel Chelly, Jean Claude Kaplan, France Leturcq.   

Abstract

In the course of a mutation search performed by muscle dystrophin transcript analysis in 72 Duchenne and Becker Muscular Dystrophies (DMD/BMD) patients without gross gene defect, we encountered four unrelated cases with additional out-of-frame sequences precisely intercalated between two intact exons of the mature muscle dystrophin mRNA. An in silico search of the whole dystrophin genomic sequence revealed that these inserts correspond to cryptic exons flanked by one strong and one weak consensus splice site and located in the mid-part of large introns (introns 60, 9, 1M, and 62, respectively). In each case we identified an intronic point mutation activating the cryptic donor or acceptor splice site. The patients exhibited a BMD/intermediate phenotype consistent with the presence of reduced amounts of normally spliced transcript and normal dystrophin. The frequency of this new type of mutation is not negligible (6% of our series of 65 patients with 'small' mutations). It would be missed if the exploration of the DMD gene is exclusively performed on exons and flanking sequences of genomic DNA.

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Year:  2004        PMID: 14659407     DOI: 10.1016/s0960-8966(03)00169-x

Source DB:  PubMed          Journal:  Neuromuscul Disord        ISSN: 0960-8966            Impact factor:   4.296


  11 in total

1.  Identification of seven novel cryptic exons embedded in the dystrophin gene and characterization of 14 cryptic dystrophin exons.

Authors:  Zhujun Zhang; Yasuaki Habara; Atsushi Nishiyama; Yoshinobu Oyazato; Mariko Yagi; Yasuhiro Takeshima; Masafumi Matsuo
Journal:  J Hum Genet       Date:  2007-06-20       Impact factor: 3.172

Review 2.  Deep intronic mutations and human disease.

Authors:  Rita Vaz-Drago; Noélia Custódio; Maria Carmo-Fonseca
Journal:  Hum Genet       Date:  2017-05-12       Impact factor: 4.132

3.  RNA-seq analysis, targeted long-read sequencing and in silico prediction to unravel pathogenic intronic events and complicated splicing abnormalities in dystrophinopathy.

Authors:  Mariko Okubo; Satoru Noguchi; Tomonari Awaya; Motoyasu Hosokawa; Nobue Tsukui; Megumu Ogawa; Shinichiro Hayashi; Hirofumi Komaki; Madoka Mori-Yoshimura; Yasushi Oya; Yuji Takahashi; Tetsuhiro Fukuyama; Michinori Funato; Yousuke Hosokawa; Satoru Kinoshita; Tsuyoshi Matsumura; Sadao Nakamura; Azusa Oshiro; Hiroshi Terashima; Tetsuro Nagasawa; Tatsuharu Sato; Yumi Shimada; Yasuko Tokita; Masatoshi Hagiwara; Katsuhisa Ogata; Ichizo Nishino
Journal:  Hum Genet       Date:  2022-09-01       Impact factor: 5.881

4.  Transposable elements in disease-associated cryptic exons.

Authors:  Igor Vorechovsky
Journal:  Hum Genet       Date:  2009-10-10       Impact factor: 4.132

5.  Categorization of 77 dystrophin exons into 5 groups by a decision tree using indexes of splicing regulatory factors as decision markers.

Authors:  Rusdy Ghazali Malueka; Yutaka Takaoka; Mariko Yagi; Hiroyuki Awano; Tomoko Lee; Ery Kus Dwianingsih; Atsushi Nishida; Yasuhiro Takeshima; Masafumi Matsuo
Journal:  BMC Genet       Date:  2012-03-31       Impact factor: 2.797

6.  Clinical and molecular characterization of a cohort of patients with novel nucleotide alterations of the Dystrophin gene detected by direct sequencing.

Authors:  Francesca Magri; Roberto Del Bo; Maria G D'Angelo; Alessandra Govoni; Serena Ghezzi; Sandra Gandossini; Monica Sciacco; Patrizia Ciscato; Andreina Bordoni; Silvana Tedeschi; Francesco Fortunato; Valeria Lucchini; Matteo Cereda; Stefania Corti; Maurizio Moggio; Nereo Bresolin; Giacomo P Comi
Journal:  BMC Med Genet       Date:  2011-03-11       Impact factor: 2.103

Review 7.  Defective splicing, disease and therapy: searching for master checkpoints in exon definition.

Authors:  Emanuele Buratti; Marco Baralle; Francisco E Baralle
Journal:  Nucleic Acids Res       Date:  2006-07-19       Impact factor: 16.971

8.  Pseudoexons of the DMD Gene.

Authors:  Niall P Keegan
Journal:  J Neuromuscul Dis       Date:  2020

9.  Very Low Residual Dystrophin Quantity Is Associated with Milder Dystrophinopathy.

Authors:  Yvan de Feraudy; Rabah Ben Yaou; Karim Wahbi; Caroline Stalens; Amalia Stantzou; Vincent Laugel; Isabelle Desguerre; Laurent Servais; France Leturcq; Helge Amthor
Journal:  Ann Neurol       Date:  2020-11-24       Impact factor: 10.422

10.  Novel Intronic Mutations Introduce Pseudoexons in DMD That Cause Muscular Dystrophy in Patients.

Authors:  Xinguo Lu; Chunxi Han; Jiahui Mai; Xianping Jiang; Jianxiang Liao; Yanqi Hou; Di Cui
Journal:  Front Genet       Date:  2021-04-16       Impact factor: 4.599

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