Literature DB >> 14657367

Coding potential of laboratory and clinical strains of human cytomegalovirus.

Eain Murphy1, Dong Yu, Jane Grimwood, Jeremy Schmutz, Mark Dickson, Michael A Jarvis, Gabriele Hahn, Jay A Nelson, Richard M Myers, Thomas E Shenk.   

Abstract

Six strains of human cytomegalovirus have been sequenced, including two laboratory strains (AD169 and Towne) that have been extensively passaged in fibroblasts and four clinical isolates that have been passaged to a limited extent in the laboratory (Toledo, FIX, PH, and TR). All of the sequenced viral genomes have been cloned as infectious bacterial artificial chromosomes. A total of 252 ORFs with the potential to encode proteins have been identified that are conserved in all four clinical isolates of the virus. Multiple sequence alignments revealed substantial variation in the amino acid sequences encoded by many of the conserved ORFs.

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Year:  2003        PMID： 14657367      PMCID： PMC299866          DOI： 10.1073/pnas.2136652100

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  45 in total

1.  Construction of a self-excisable bacterial artificial chromosome containing the human cytomegalovirus genome and mutagenesis of the diploid TRL/IRL13 gene.

Authors:  Dong Yu; Gregory A Smith; Lynn W Enquist; Thomas Shenk
Journal:  J Virol       Date:  2002-03       Impact factor: 5.103

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Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

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Authors:  M O'Connor; M Peifer; W Bender
Journal:  Science       Date:  1989-06-16       Impact factor: 47.728

Review 4.  Analysis of the protein-coding content of the sequence of human cytomegalovirus strain AD169.

Authors:  M S Chee; A T Bankier; S Beck; R Bohni; C M Brown; R Cerny; T Horsnell; C A Hutchison; T Kouzarides; J A Martignetti
Journal:  Curr Top Microbiol Immunol       Date:  1990       Impact factor: 4.291

5.  Abundant 5 kb RNA of human cytomegalovirus without a major translational reading frame.

Authors:  B Plachter; B Traupe; J Albrecht; G Jahn
Journal:  J Gen Virol       Date:  1988-09       Impact factor: 3.891

6.  Organization and expression of the major genes from the long inverted repeat of the human cytomegalovirus genome.

Authors:  N I Hutchinson; R T Sondermeyer; M J Tocci
Journal:  Virology       Date:  1986-11       Impact factor: 3.616

7.  Comparative sequence analysis of human cytomegalovirus strains.

Authors:  R Lehner; T Stamminger; M Mach
Journal:  J Clin Microbiol       Date:  1991-11       Impact factor: 5.948

8.  Human cytomegalovirus with IE-2 (UL122) deleted fails to express early lytic genes.

Authors:  A Marchini; H Liu; H Zhu
Journal:  J Virol       Date:  2001-02       Impact factor: 5.103

9.  Modification of human cytomegalovirus tropism through propagation in vitro is associated with changes in the viral genome.

Authors:  C Sinzger; K Schmidt; J Knapp; M Kahl; R Beck; J Waldman; H Hebart; H Einsele; G Jahn
Journal:  J Gen Virol       Date:  1999-11       Impact factor: 3.891

Review 10.  A review of genetic differences between limited and extensively passaged human cytomegalovirus strains.

Authors:  M N Prichard; M E Penfold; G M Duke; R R Spaete; G W Kemble
Journal:  Rev Med Virol       Date:  2001 May-Jun       Impact factor: 6.989
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  280 in total

1.  Human cytomegalovirus induces multiple means to combat reactive oxygen species.

Authors:  Carisa Tilton; Amy J Clippinger; Tobi Maguire; James C Alwine
Journal:  J Virol       Date:  2011-09-21       Impact factor: 5.103

2.  Characterization of the human cytomegalovirus UL34 gene.

Authors:  B J Biegalke; E Lester; A Branda; R Rana
Journal:  J Virol       Date:  2004-09       Impact factor: 5.103

Review 3.  Modulation of host innate and adaptive immune defenses by cytomegalovirus: timing is everything.

Authors:  A Loewendorf; C A Benedict
Journal:  J Intern Med       Date:  2010-05       Impact factor: 8.989

4.  RASCAL is a new human cytomegalovirus-encoded protein that localizes to the nuclear lamina and in cytoplasmic vesicles at late times postinfection.

Authors:  Matthew S Miller; Wendy E Furlong; Leesa Pennell; Marc Geadah; Laura Hertel
Journal:  J Virol       Date:  2010-04-14       Impact factor: 5.103

5.  Herpesvirus systematics.

Authors:  Andrew J Davison
Journal:  Vet Microbiol       Date:  2010-02-11       Impact factor: 3.293

6.  Human cytomegalovirus: bacterial artificial chromosome (BAC) cloning and genetic manipulation.

Authors:  Anne M Paredes; Dong Yu
Journal:  Curr Protoc Microbiol       Date:  2012-02

7.  Human cytomegalovirus pUL83 stimulates activity of the viral immediate-early promoter through its interaction with the cellular IFI16 protein.

Authors:  Ileana M Cristea; Nathaniel J Moorman; Scott S Terhune; Christian D Cuevas; Erin S O'Keefe; Michael P Rout; Brian T Chait; Thomas Shenk
Journal:  J Virol       Date:  2010-05-26       Impact factor: 5.103

8.  Three-dimensional structure of the human cytomegalovirus cytoplasmic virion assembly complex includes a reoriented secretory apparatus.

Authors:  Subhendu Das; Amit Vasanji; Philip E Pellett
Journal:  J Virol       Date:  2007-08-22       Impact factor: 5.103

9.  Coding potential of UL/b' from the initial source of rhesus cytomegalovirus Strain 68-1.

Authors:  Rachel B Gill; J Jason Bowman; Tammy Krogmann; Kurt Wollenberg; David M Asher; Jeffrey I Cohen
Journal:  Virology       Date:  2013-10-02       Impact factor: 3.616

10.  Characterization of an antisense transcript spanning the UL81-82 locus of human cytomegalovirus.

Authors:  Mariana Bego; J Maciejewski; S Khaiboullina; G Pari; S St Jeor
Journal:  J Virol       Date:  2005-09       Impact factor: 5.103
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