Literature DB >> 14654236

Novel vanadium-binding proteins (vanabins) identified in cDNA libraries and the genome of the ascidian Ciona intestinalis.

Subrata Trivedi1, Tatsuya Ueki, Nobuo Yamaguchi, Hitoshi Michibata.   

Abstract

Ascidians, especially those belonging to the suborder Phlebobranchia, can accumulate high levels of vanadium. Vanadium-binding proteins (vanabins) were first isolated from a vanadium-accumulating ascidian, Ascidia sydneiensis samea, and then the vanabins were cloned, their expression was studied, and metal-binding assays were conducted. In order to unravel the mechanism of vanadium accumulation, we searched for vanabin-like genes in other animals, including other ascidians. A database search revealed five groups of cDNAs that encoded vanabin-like proteins in another ascidian, Ciona intestinalis. The genes encoding C. intestinalis vanabins, CiVanabin1 to CiVanabin5, were clustered in an 8.4-kb genomic region. The direction of transcription of each gene was identical and each gene had a single intron. All the C. intestinalis vanabins were cysteine-rich, and the repetitive pattern of cysteines closely resembled that of A. sydneiensis samea vanabins. Using immobilized metal ion affinity chromatography (IMAC), we found that a recombinant protein of at least one of the C. intestinalis vanabins (CiVanabin5) bound to vanadium(IV) ions.

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Year:  2003        PMID: 14654236     DOI: 10.1016/j.bbaexp.2003.09.007

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  5 in total

1.  Identification of a novel vanadium-binding protein by EST analysis on the most vanadium-rich ascidian, Ascidia gemmata.

Authors:  Setijono Samino; Hitoshi Michibata; Tatsuya Ueki
Journal:  Mar Biotechnol (NY)       Date:  2011-07-06       Impact factor: 3.619

2.  Arsenic (+ 3 oxidation state) methyltransferase and the methylation of arsenicals in the invertebrate chordate Ciona intestinalis.

Authors:  David J Thomas; Gerardo M Nava; Shi-Ying Cai; James L Boyer; Araceli Hernández-Zavala; H Rex Gaskins
Journal:  Toxicol Sci       Date:  2009-10-15       Impact factor: 4.849

Review 3.  Role of DNA barcoding in marine biodiversity assessment and conservation: An update.

Authors:  Subrata Trivedi; Abdulhadi A Aloufi; Abid A Ansari; Sankar K Ghosh
Journal:  Saudi J Biol Sci       Date:  2015-01-12       Impact factor: 4.219

4.  Culture-Dependent Microbiome of the Ciona intestinalis Tunic: Isolation, Bioactivity Profiling and Untargeted Metabolomics.

Authors:  Caroline Utermann; Vivien A Echelmeyer; Martina Blümel; Deniz Tasdemir
Journal:  Microorganisms       Date:  2020-11-05

5.  The acidic amino acid-rich C-terminal domain of VanabinX enhances reductase activity, attaining 1.3- to 1.7-fold vanadium reduction.

Authors:  Tri Kustono Adi; Manabu Fujie; Nori Satoh; Tatsuya Ueki
Journal:  Biochem Biophys Rep       Date:  2022-09-16
  5 in total

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