Literature DB >> 14652184

A model for energy transfer in inelastic molecular collisions applicable at steady state or non-steady state and for an arbitrary distribution of collision energies.

Wolfgang R Plass1, R Graham Cooks.   

Abstract

A new model for energy exchange between translational and internal degrees of freedom in atom-molecule collisions has been developed. It is suitable for both steady state conditions (e.g., a large number of collisions with thermal kinetic energies) and non-steady state conditions with an arbitrary distribution of collision energies (e.g., single high-energy collisions). In particular, it does not require that the collision energies be characterized by a quasi-thermal distribution, but nevertheless it is capable of producing a Boltzmann distribution of internal energies with the correct internal temperature under quasi-thermal conditions. The energy exchange is described by a transfer probability density that depends on the initial relative kinetic energy, the internal energy of the molecule, and the amount of energy transferred. The probability density for collisions that lead to excitation is assumed to decrease exponentially with the amount of transferred energy. The probability density for de-excitation is obtained from microscopic reversibility. The model has been implemented in the ion trap simulation program ITSIM and coupled with an Rice-Rampsberger-Kassel-Marcus (RRKM) algorithm to describe the unimolecular dissociation of populations of ions. Monte Carlo simulations of collisional energy transfer are presented. The model is validated for non-steady state conditions and for steady state conditions, and the effect of the kinetic energy dependence of the collision cross-section on internal temperature is discussed. Applications of the model to the problem of chemical mass shifts in RF ion trap mass spectrometry are shown.

Entities:  

Year:  2003        PMID: 14652184     DOI: 10.1016/j.jasms.2003.08.012

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  5 in total

1.  Simulation for internal energy deposition in sustained off-resonance irradiation collisional activation using a monte carlo method

Authors: 
Journal:  Rapid Commun Mass Spectrom       Date:  1999       Impact factor: 2.419

2.  A database of 660 peptide ion cross sections: use of intrinsic size parameters for bona fide predictions of cross sections.

Authors:  S J Valentine; A E Counterman; D E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  1999-11       Impact factor: 3.109

Review 3.  MassKinetics: a theoretical model of mass spectra incorporating physical processes, reaction kinetics and mathematical descriptions.

Authors:  L Drahos; K Vékey
Journal:  J Mass Spectrom       Date:  2001-03       Impact factor: 1.982

4.  Principles of collisional activation in analytical mass spectrometry.

Authors:  S A McLuckey
Journal:  J Am Soc Mass Spectrom       Date:  1992-09       Impact factor: 3.109

5.  Multiparticle simulation of ion motion in the ion trap mass spectrometer: Resonant and direct current pulse excitation.

Authors:  R K Julian; M Nappi; C Weil; R G Cooks
Journal:  J Am Soc Mass Spectrom       Date:  1995-01       Impact factor: 3.109

  5 in total
  8 in total

1.  Collisional activation of ions in RF ion traps and ion guides: the effective ion temperature treatment.

Authors:  Aleksey V Tolmachev; Andrey N Vilkov; Bogdan Bogdanov; Ljiljana Pasa-Tolić; Christophe D Masselon; Richard D Smith
Journal:  J Am Soc Mass Spectrom       Date:  2004-11       Impact factor: 3.109

2.  High amplitude short time excitation: a method to form and detect low mass product ions in a quadrupole ion trap mass spectrometer.

Authors:  Connell Cunningham; Gary L Glish; David J Burinsky
Journal:  J Am Soc Mass Spectrom       Date:  2005-12-15       Impact factor: 3.109

3.  Ion trajectory simulation for electrode configurations with arbitrary geometries.

Authors:  Guangxiang Wu; R Graham Cooks; Zheng Ouyang; Meng Yu; William J Chappell; Wolfgang R Plass
Journal:  J Am Soc Mass Spectrom       Date:  2006-06-21       Impact factor: 3.109

4.  Fluorescence imaging for visualization of the ion cloud in a quadrupole ion trap mass spectrometer.

Authors:  Francis O Talbot; Stephen V Sciuto; Rebecca A Jockusch
Journal:  J Am Soc Mass Spectrom       Date:  2013-10-02       Impact factor: 3.109

5.  On the time scale of internal energy relaxation of AP-MALDI and nano-ESI ions in a quadrupole ion trap.

Authors:  Philip M Remes; Gary L Glish
Journal:  J Am Soc Mass Spectrom       Date:  2009-06-21       Impact factor: 3.109

6.  Flowing gas in mass spectrometer: method for characterization and impact on ion processing.

Authors:  Xiaoyu Zhou; Zheng Ouyang
Journal:  Analyst       Date:  2014-08-14       Impact factor: 4.616

7.  Using dissociation energies to predict observability of b- and y-peaks in mass spectra of short peptides. II. Results for hexapeptides with non-polar side chains.

Authors:  O I Obolensky; Wells W Wu; Rong-Fong Shen; Yi-Kuo Yu
Journal:  Rapid Commun Mass Spectrom       Date:  2013-01-15       Impact factor: 2.419

8.  Study of In-Trap Ion Clouds by Ion Trajectory Simulations.

Authors:  Xiaoyu Zhou; Xinwei Liu; Wenbo Cao; Xiao Wang; Ming Li; Haoxue Qiao; Zheng Ouyang
Journal:  J Am Soc Mass Spectrom       Date:  2017-10-17       Impact factor: 3.109

  8 in total

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