Literature DB >> 14646142

Water and glycerol permeation through the glycerol channel GlpF and the aquaporin family.

John K Lee1, Shahram Khademi, William Harries, David Savage, Larry Miercke, Robert M Stroud.   

Abstract

The 2.2 A resolution crystal structure of GlpF, an E. coli aquaporin that facilitates the flow of glycerol, water and other small solutes, provides much insight into the molecular function and selectivity of aquaporins. Using GlpF and its atomic structure as a paradigm for the ten highly conserved human aquaporins, site-directed mutagenesis has been used to mutate residues that are possibly integral to the structure and function of different aquaporins. X-ray crystallography and other biophysical and molecular simulation methods allows for assessment of these changes at the structural and functional level. Initial attempts to convert the glycerol specific properties of GlpF towards a water specific aquaporin resulted in the shifting of GlpF channel properties towards that of the water aquaporins. This result reveals the great possibility of emulating and deciphering the function of other aquaporins with GlpF via mutagenesis and investigation of structure and function.

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Year:  2003        PMID: 14646142     DOI: 10.1107/s0909049503023872

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  11 in total

1.  Diffusion of glycerol through Escherichia coli aquaglyceroporin GlpF.

Authors:  Jérôme Hénin; Emad Tajkhorshid; Klaus Schulten; Christophe Chipot
Journal:  Biophys J       Date:  2007-10-05       Impact factor: 4.033

2.  Erythritol predicted to inhibit permeation of water and solutes through the conducting pore of P. falciparum aquaporin.

Authors:  Liao Y Chen
Journal:  Biophys Chem       Date:  2015-01-14       Impact factor: 2.352

3.  pH sensitivity of ammonium transport by Rhbg.

Authors:  Nazih L Nakhoul; Solange M Abdulnour-Nakhoul; Eric Schmidt; Rienk Doetjes; Edd Rabon; L Lee Hamm
Journal:  Am J Physiol Cell Physiol       Date:  2010-09-01       Impact factor: 4.249

4.  Application of the Brown dynamics fluctuation-dissipation theorem to the study of Plasmodium berghei transporter protein PbAQP.

Authors:  Liao Y Chen
Journal:  Front Phys       Date:  2020-04-17

5.  Aspergillus glaucus Aquaglyceroporin Gene glpF Confers High Osmosis Tolerance in Heterologous Organisms.

Authors:  Xiao-Dan Liu; Yi Wei; Xiao-Yang Zhou; Xue Pei; Shi-Hong Zhang
Journal:  Appl Environ Microbiol       Date:  2015-07-24       Impact factor: 4.792

6.  Computing osmotic permeabilities of aquaporins AQP4, AQP5, and GlpF from near-equilibrium simulations.

Authors:  Thierry O Wambo; Roberto A Rodriguez; Liao Y Chen
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-04-25       Impact factor: 3.747

7.  Glycerol inhibits water permeation through Plasmodium falciparum aquaglyceroporin.

Authors:  Liao Y Chen
Journal:  J Struct Biol       Date:  2012-10-26       Impact factor: 2.867

8.  Glycerol modulates water permeation through Escherichia coli aquaglyceroporin GlpF.

Authors:  Liao Y Chen
Journal:  Biochim Biophys Acta       Date:  2013-03-16

9.  Molecular dynamics study of the archaeal aquaporin AqpM.

Authors:  Raul Araya-Secchi; J A Garate; David S Holmes; Tomas Perez-Acle
Journal:  BMC Genomics       Date:  2011-12-22       Impact factor: 3.969

10.  PoreWalker: a novel tool for the identification and characterization of channels in transmembrane proteins from their three-dimensional structure.

Authors:  Marialuisa Pellegrini-Calace; Tim Maiwald; Janet M Thornton
Journal:  PLoS Comput Biol       Date:  2009-07-17       Impact factor: 4.475

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