Literature DB >> 14643210

Focal pair merging for contrast enhancement of single particles.

Steven J Ludtke1, Wah Chiu.   

Abstract

A common technique in transmission electron microscopy is the collection of a focal pair, in which the first, close to focus image contains higher resolution information at lower contrast, and the second, far from focus image has high contrast but less reliable high-resolution information. Typically these second micrographs are used for purposes of particle selection, orientation estimate or micrograph evaluation. We introduce a technique for merging the information from both images, including signal to noise ratio weighting, contrast transfer function correction, and optional Weiner filtration. This produces a composite image with reduced contrast transfer function artifacts and optimized contrast. This technique is useful in numerous cases where low-contrast images are produced, such as small particles, proteins solubilized in detergent or projects with high-resolution goals when the first image is taken very close to focus.

Mesh:

Substances:

Year:  2003        PMID: 14643210     DOI: 10.1016/j.jsb.2003.10.012

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  5 in total

1.  Common architecture of the flagellar type III protein export apparatus and F- and V-type ATPases.

Authors:  Tatsuya Ibuki; Katsumi Imada; Tohru Minamino; Takayuki Kato; Tomoko Miyata; Keiichi Namba
Journal:  Nat Struct Mol Biol       Date:  2011-01-30       Impact factor: 15.369

2.  Statistical modeling and removal of lipid membrane projections for cryo-EM structure determination of reconstituted membrane proteins.

Authors:  Katrine Hommelhoff Jensen; Sami Sebastian Brandt; Hideki Shigematsu; Fred J Sigworth
Journal:  J Struct Biol       Date:  2016-02-01       Impact factor: 2.867

3.  Self-assembly of size-controlled liposomes on DNA nanotemplates.

Authors:  Yang Yang; Jing Wang; Hideki Shigematsu; Weiming Xu; William M Shih; James E Rothman; Chenxiang Lin
Journal:  Nat Chem       Date:  2016-03-21       Impact factor: 24.427

4.  Common evolutionary origin for the rotor domain of rotary ATPases and flagellar protein export apparatus.

Authors:  Jun-ichi Kishikawa; Tatsuya Ibuki; Shuichi Nakamura; Astuko Nakanishi; Tohru Minamino; Tomoko Miyata; Keiichi Namba; Hiroki Konno; Hiroshi Ueno; Katsumi Imada; Ken Yokoyama
Journal:  PLoS One       Date:  2013-05-28       Impact factor: 3.240

Review 5.  Three dimensional electron microscopy and in silico tools for macromolecular structure determination.

Authors:  Subhomoi Borkotoky; Chetan Kumar Meena; Mohammad Wahab Khan; Ayaluru Murali
Journal:  EXCLI J       Date:  2013-04-24       Impact factor: 4.068

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.