Literature DB >> 14638327

Turning the clock back on ancient genome duplication.

Cathal Seoighe1.   

Abstract

Complete genome sequence data led rapidly to the conclusion that ancient genome duplications had shaped the genomes of the model organisms Saccharomyces cerevisiae and Arabidopsis thaliana. Recent contributions have gone on to refine date estimates for these duplications and, in the case of Arabidopsis, to infer additional, more ancient, rounds of duplication by reconstructing gene order before the most recent duplication event. It is becoming widely accepted that an ancient duplication occurred before the radiation of the ray-finned fish. However, despite methodological advances and the availability of complete genome sequence data the debate over whether very ancient genome duplications have occurred early in the vertebrate lineage has not yet been fully resolved.

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Year:  2003        PMID: 14638327     DOI: 10.1016/j.gde.2003.10.005

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  10 in total

1.  Molecular evidence for asymmetric evolution of sister duplicated blocks after cereal polyploidy.

Authors:  Hongbin Wang; Lujun Yu; Fei Lai; Liangshi Liu; Jinfa Wang
Journal:  Plant Mol Biol       Date:  2005-09       Impact factor: 4.076

2.  Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates.

Authors:  Yoichiro Nakatani; Hiroyuki Takeda; Yuji Kohara; Shinichi Morishita
Journal:  Genome Res       Date:  2007-07-25       Impact factor: 9.043

Review 3.  Evolutionary consequences, constraints and potential of polyploidy in plants.

Authors:  H Weiss-Schneeweiss; K Emadzade; T-S Jang; G M Schneeweiss
Journal:  Cytogenet Genome Res       Date:  2013-06-18       Impact factor: 1.636

4.  Phylogenetic detection of numerous gene duplications shared by animals, fungi and plants.

Authors:  Xiaofan Zhou; Zhenguo Lin; Hong Ma
Journal:  Genome Biol       Date:  2010-04-06       Impact factor: 13.583

5.  Coding limits on the number of transcription factors.

Authors:  Shalev Itzkovitz; Tsvi Tlusty; Uri Alon
Journal:  BMC Genomics       Date:  2006-09-19       Impact factor: 3.969

6.  Evolution of secretin family GPCR members in the metazoa.

Authors:  João C R Cardoso; Vanda C Pinto; Florbela A Vieira; Melody S Clark; Deborah M Power
Journal:  BMC Evol Biol       Date:  2006-12-13       Impact factor: 3.260

7.  A De Novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny.

Authors:  Boas Pucker; Daniela Holtgräwe; Thomas Rosleff Sörensen; Ralf Stracke; Prisca Viehöver; Bernd Weisshaar
Journal:  PLoS One       Date:  2016-10-06       Impact factor: 3.240

8.  The E-Subgroup Pentatricopeptide Repeat Protein Family in Arabidopsis thaliana and Confirmation of the Responsiveness PPR96 to Abiotic Stresses.

Authors:  Jia-Ming Liu; Juan-Ying Zhao; Pan-Pan Lu; Ming Chen; Chang-Hong Guo; Zhao-Shi Xu; You-Zhi Ma
Journal:  Front Plant Sci       Date:  2016-12-05       Impact factor: 5.753

9.  Ancient duplicated conserved noncoding elements in vertebrates: a genomic and functional analysis.

Authors:  Gayle K McEwen; Adam Woolfe; Debbie Goode; Tanya Vavouri; Heather Callaway; Greg Elgar
Journal:  Genome Res       Date:  2006-03-13       Impact factor: 9.043

10.  Persistence of duplicated PAC1 receptors in the teleost, Sparus auratus.

Authors:  João C R Cardoso; Edwin C J M de Vet; Bruno Louro; Greg Elgar; Melody S Clark; Deborah M Power
Journal:  BMC Evol Biol       Date:  2007-11-12       Impact factor: 3.260

  10 in total

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