Literature DB >> 14637252

Repair of abasic sites in DNA.

Grigory L Dianov1, Kate M Sleeth, Irina I Dianova, Sarah L Allinson.   

Abstract

Repair of both normal and reduced AP sites is activated by AP endonuclease, which recognizes and cleaves a phosphodiester bond 5' to the AP site. For a short period of time an incised AP site is occupied by poly(ADP-ribose) polymerase and then DNA polymerase beta adds one nucleotide into the repair gap and simultaneously removes the 5'-sugar phosphate. Finally, the DNA ligase III/XRCC1 complex accomplishes repair by sealing disrupted DNA ends. However, long-patch BER pathway, which is involved in the removal of reduced abasic sites, requires further DNA synthesis resulting in strand displacement and the generation of a damage-containing flap that is later removed by the flap endonuclease. Strand-displacement DNA synthesis is accomplished by DNA polymerase delta/epsilon and DNA ligase I restores DNA integrity. DNA synthesis by DNA polymerase delta/epsilon is dependent on proliferating cell nuclear antigen, which also stimulates the DNA ligase I and flap endonuclease. These repair events are supported by multiple protein-protein interactions.

Entities:  

Mesh:

Year:  2003        PMID: 14637252     DOI: 10.1016/j.mrfmmm.2003.09.003

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  68 in total

1.  Excision of a lyase-resistant oxidized abasic lesion from DNA.

Authors:  Remus S Wong; Jonathan T Sczepanski; Marc M Greenberg
Journal:  Chem Res Toxicol       Date:  2010-04-19       Impact factor: 3.739

Review 2.  Rapid changes in plant genomes.

Authors:  Steven Henikoff
Journal:  Plant Cell       Date:  2005-11       Impact factor: 11.277

Review 3.  A role for the base excision repair enzyme NEIL3 in replication-dependent repair of interstrand DNA cross-links derived from psoralen and abasic sites.

Authors:  Zhiyu Yang; Maryam Imani Nejad; Jacqueline Gamboa Varela; Nathan E Price; Yinsheng Wang; Kent S Gates
Journal:  DNA Repair (Amst)       Date:  2017-02-20

Review 4.  Base excision repair, aging and health span.

Authors:  Guogang Xu; Maryanne Herzig; Vladimir Rotrekl; Christi A Walter
Journal:  Mech Ageing Dev       Date:  2008-03-13       Impact factor: 5.432

Review 5.  Investigating the biochemical impact of DNA damage with structure-based probes: abasic sites, photodimers, alkylation adducts, and oxidative lesions.

Authors:  Heidi A Dahlmann; V G Vaidyanathan; Shana J Sturla
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

6.  APE1 Asp148Glu polymorphism and lung cancer susceptibility.

Authors:  Liyun Cai; Yingjv Fu; Yuanyue Zhang
Journal:  Tumour Biol       Date:  2014-02-13

7.  Quantitation of Apurinic/Apyrimidinic Sites in Isolated DNA and in Mammalian Tissue with a Reduced Level of Artifacts.

Authors:  Haoqing Chen; Lihua Yao; Christina Brown; Carmelo J Rizzo; Robert J Turesky
Journal:  Anal Chem       Date:  2019-05-13       Impact factor: 6.986

8.  Human AlkB homologue 1 (ABH1) exhibits DNA lyase activity at abasic sites.

Authors:  Tina A Müller; Katheryn Meek; Robert P Hausinger
Journal:  DNA Repair (Amst)       Date:  2009-12-02

9.  Sculpting of DNA at abasic sites by DNA glycosylase homolog mag2.

Authors:  Bjørn Dalhus; Line Nilsen; Hanne Korvald; Joy Huffman; Rune Johansen Forstrøm; Cynthia T McMurray; Ingrun Alseth; John A Tainer; Magnar Bjørås
Journal:  Structure       Date:  2012-12-13       Impact factor: 5.006

10.  Arabidopsis uracil DNA glycosylase (UNG) is required for base excision repair of uracil and increases plant sensitivity to 5-fluorouracil.

Authors:  Dolores Córdoba-Cañero; Emeline Dubois; Rafael R Ariza; Marie-Pascale Doutriaux; Teresa Roldán-Arjona
Journal:  J Biol Chem       Date:  2010-01-07       Impact factor: 5.157

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