Literature DB >> 14633398

On the complexity of fundamental computational problems in pedigree analysis.

Antonio Piccolboni1, Dan Gusfield.   

Abstract

Pedigree analysis is a central component of many current efforts to locate genes that contribute to diseases or to valuable traits. The analysis usually involves solving one of two very computation-intense problems. We analyze the complexity of these two problems. Surprisingly, we show that both problems are NP-hard even for pedigrees that contain no inbreeding loops.

Mesh:

Year:  2003        PMID: 14633398     DOI: 10.1089/106652703322539088

Source DB:  PubMed          Journal:  J Comput Biol        ISSN: 1066-5277            Impact factor:   1.479


  3 in total

1.  Haplotypes versus genotypes on pedigrees.

Authors:  Bonnie B Kirkpatrick
Journal:  Algorithms Mol Biol       Date:  2011-04-19       Impact factor: 1.405

2.  Efficient genome ancestry inference in complex pedigrees with inbreeding.

Authors:  Eric Yi Liu; Qi Zhang; Leonard McMillan; Fernando Pardo-Manuel de Villena; Wei Wang
Journal:  Bioinformatics       Date:  2010-06-15       Impact factor: 6.937

3.  Isomorphism and similarity for 2-generation pedigrees.

Authors:  Haitao Jiang; Guohui Lin; Weitian Tong; Daming Zhu; Binhai Zhu
Journal:  BMC Bioinformatics       Date:  2015-03-18       Impact factor: 3.169

  3 in total

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