Literature DB >> 14632462

Comparative assessment of multiresponse regression methods for predicting the mechanisms of toxic action of phenols.

Shijin Ren1, Hyunjoong Kim.   

Abstract

The use of regression methods for classifying and predicting the mechanisms of toxic action of phenols was investigated in this study. Multiresponse regression was conducted using a total of six linear and nonlinear regression methods: simple linear regression (LinReg), logistic regression (LogReg), generalized additive model (GAM), locally weighted regression scatter plot smoothing (LOWESS), multivariate adaptive regression splines (MARS), and projection pursuit regression (PPR). A database containing phenols acting by four mechanisms (polar narcosis, weak acid respiratory uncoupling, proelectrophilicity, and soft electrophilicity) was used to assess the performances of the six regression methods in the multiresponse regression approach. For comparison purposes, traditional linear discriminant analysis (LDA) was also conducted as a baseline method to study the potential improvement of prediction accuracy by the multiresponse regression approach. Results showed that compared to LDA, the overall mechanism prediction error rate could be reduced to below 10% by multiresponse regression based on PPR. In addition to prediction accuracy, interpretability of the resultant models was discussed.

Entities:  

Year:  2003        PMID: 14632462     DOI: 10.1021/ci034092y

Source DB:  PubMed          Journal:  J Chem Inf Comput Sci        ISSN: 0095-2338


  4 in total

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Journal:  J Expo Sci Environ Epidemiol       Date:  2008-03-26       Impact factor: 5.563

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Journal:  J Med Syst       Date:  2009-09-10       Impact factor: 4.460

Review 3.  Considerations and recent advances in QSAR models for cytochrome P450-mediated drug metabolism prediction.

Authors:  Haiyan Li; Jin Sun; Xiaowen Fan; Xiaofan Sui; Lan Zhang; Yongjun Wang; Zhonggui He
Journal:  J Comput Aided Mol Des       Date:  2008-06-24       Impact factor: 3.686

4.  Generalized Additive Mixed-Models for Pharmacology Using Integrated Discrete Multiple Organ Co-Culture.

Authors:  Thomas Ingersoll; Stephanie Cole; Janna Madren-Whalley; Lamont Booker; Russell Dorsey; Albert Li; Harry Salem
Journal:  PLoS One       Date:  2016-04-25       Impact factor: 3.240

  4 in total

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