Literature DB >> 14625869

Further advances in the development of a data interchange standard for proteomics data.

Sandra Orchard1, Weimin Zhu, Randall K Julian, Henning Hermjakob, Rolf Apweiler.   

Abstract

The Protein Standards Initiative (PSI) aims to define community standards for data representation in proteomics and to facilitate data comparison, exchange and verification. Significant progress was made in advancing the design and implementation of a draft standard for exchanging experimental data from proteomics experiments involving mass spectrometry at the 51st Annual Conference of the American Society for Mass Spectrometry. In collaboration with the American Society for Tests and Measurements, the PSI propose to publish this first draft at the forthcoming HUPO 2nd World Congress in Montreal, 8-11 October 2003.

Mesh:

Year:  2003        PMID: 14625869     DOI: 10.1002/pmic.200300588

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  5 in total

1.  Expression analysis, single nucleotide polymorphisms and combined genotypes in candidate genes and their associations with growth and carcass traits in Qinchuan cattle.

Authors:  Li-jun Wang; Xiao-lin Liu; Hong-liang Wang; Hua He; Zhi-xiong Li; Ling Chen
Journal:  Mol Biol Rep       Date:  2012-11-30       Impact factor: 2.316

2.  mzML--a community standard for mass spectrometry data.

Authors:  Lennart Martens; Matthew Chambers; Marc Sturm; Darren Kessner; Fredrik Levander; Jim Shofstahl; Wilfred H Tang; Andreas Römpp; Steffen Neumann; Angel D Pizarro; Luisa Montecchi-Palazzi; Natalie Tasman; Mike Coleman; Florian Reisinger; Puneet Souda; Henning Hermjakob; Pierre-Alain Binz; Eric W Deutsch
Journal:  Mol Cell Proteomics       Date:  2010-08-17       Impact factor: 5.911

3.  Efficient analysis and extraction of MS/MS result data from Mascot result files.

Authors:  Florian Grosse-Coosmann; Andreas M Boehm; Albert Sickmann
Journal:  BMC Bioinformatics       Date:  2005-12-07       Impact factor: 3.169

4.  PEDRo: a database for storing, searching and disseminating experimental proteomics data.

Authors:  Kevin Garwood; Thomas McLaughlin; Chris Garwood; Scott Joens; Norman Morrison; Christopher F Taylor; Kathleen Carroll; Caroline Evans; Anthony D Whetton; Sarah Hart; David Stead; Zhikang Yin; Alistair J P Brown; Andrew Hesketh; Keith Chater; Lena Hansson; Muriel Mewissen; Peter Ghazal; Julie Howard; Kathryn S Lilley; Simon J Gaskell; Andy Brass; Simon J Hubbard; Stephen G Oliver; Norman W Paton
Journal:  BMC Genomics       Date:  2004-09-17       Impact factor: 3.969

Review 5.  Development of data representation standards by the human proteome organization proteomics standards initiative.

Authors:  Eric W Deutsch; Juan Pablo Albar; Pierre-Alain Binz; Martin Eisenacher; Andrew R Jones; Gerhard Mayer; Gilbert S Omenn; Sandra Orchard; Juan Antonio Vizcaíno; Henning Hermjakob
Journal:  J Am Med Inform Assoc       Date:  2015-02-28       Impact factor: 4.497

  5 in total

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