Literature DB >> 14616059

Unusual life style of giant chlorella viruses.

James L Van Etten1.   

Abstract

Paramecium bursaria chlorella virus (PBCV-1) is the prototype of a family of large, icosahedral, plaque-forming, dsDNA viruses that replicate in certain unicellular, eukaryotic chlorella-like green algae. Its 330-kb genome contains approximately 373 protein-encoding genes and 11 tRNA genes. The predicted gene products of approximately 50% of these genes resemble proteins of known function, including many that are unexpected for a virus, e.g., ornithine decarboxylase, hyaluronan synthase, GDP-D-mannose 4,6 dehydratase, and a potassium ion channel protein. In addition to their large genome size, the chlorella viruses have other features that distinguish them from most viruses. These features include: (a) The viruses encode multiple DNA methyltransferases and DNA site-specific endonucleases. (b) The viruses encode at least some, if not all, of the enzymes required to glycosylate their proteins. (c) PBCV-1 has at least three types of introns, a self-splicing intron in a transcription factor-like gene, a spliceosomal processed intron in its DNA polymerase gene, and a small intron in one of its tRNA genes. (d) Many chlorella virus-encoded proteins are either the smallest or among the smallest proteins of their class. (e) Accumulating evidence indicates that the chlorella viruses have a very long evolutionary history.

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Year:  2003        PMID: 14616059     DOI: 10.1146/annurev.genet.37.110801.143915

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  71 in total

1.  Identification of an L-rhamnose synthetic pathway in two nucleocytoplasmic large DNA viruses.

Authors:  Madhu Parakkottil Chothi; Garry A Duncan; Andrea Armirotti; Chantal Abergel; James R Gurnon; James L Van Etten; Cinzia Bernardi; Gianluca Damonte; Michela Tonetti
Journal:  J Virol       Date:  2010-06-10       Impact factor: 5.103

2.  Small potassium ion channel proteins encoded by chlorella viruses.

Authors:  Ming Kang; Anna Moroni; Sabrina Gazzarrini; Dario DiFrancesco; Gerhard Thiel; Maria Severino; James L Van Etten
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-04       Impact factor: 11.205

3.  Biography of James L. Van Etten.

Authors:  Christen Brownlee
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-05       Impact factor: 11.205

4.  Crystallization of Chlorella deoxyuridine triphosphatase.

Authors:  Laura Badalucco; Ishwari Poudel; Mamoru Yamanishi; Chandrasekhar Natarajan; Hideaki Moriyama
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-26

5.  Origin and evolution of eukaryotic large nucleo-cytoplasmic DNA viruses.

Authors:  Eugene V Koonin; Natalya Yutin
Journal:  Intervirology       Date:  2010-06-15       Impact factor: 1.763

Review 6.  Cell Walls and the Convergent Evolution of the Viral Envelope.

Authors:  Jan P Buchmann; Edward C Holmes
Journal:  Microbiol Mol Biol Rev       Date:  2015-12       Impact factor: 11.056

7.  Plus and minus sexual agglutinins from Chlamydomonas reinhardtii.

Authors:  Patrick J Ferris; Sabine Waffenschmidt; James G Umen; Huawen Lin; Jae-Hyeok Lee; Koichi Ishida; Takeaki Kubo; Jeffrey Lau; Ursula W Goodenough
Journal:  Plant Cell       Date:  2005-01-19       Impact factor: 11.277

8.  The marine algal virus PpV01 has an icosahedral capsid with T=219 quasisymmetry.

Authors:  Xiaodong Yan; Paul R Chipman; Tonje Castberg; Gunnar Bratbak; Timothy S Baker
Journal:  J Virol       Date:  2005-07       Impact factor: 5.103

9.  A model-based parallel origin and orientation refinement algorithm for cryoTEM and its application to the study of virus structures.

Authors:  Yongchang Ji; Dan C Marinescu; Wei Zhang; Xing Zhang; Xiaodong Yan; Timothy S Baker
Journal:  J Struct Biol       Date:  2005-12-05       Impact factor: 2.867

10.  Cloning of CviPII nicking and modification system from chlorella virus NYs-1 and application of Nt.CviPII in random DNA amplification.

Authors:  Siu-hong Chan; Zhenyu Zhu; James L Van Etten; Shuang-yong Xu
Journal:  Nucleic Acids Res       Date:  2004-11-29       Impact factor: 16.971

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