Literature DB >> 14605179

Collaborative consensus for optimized multilocus sequence typing of Candida albicans.

M-E Bougnoux1, A Tavanti, C Bouchier, N A R Gow, A Magnier, A D Davidson, M C J Maiden, C D'Enfert, F C Odds.   

Abstract

A panel of 86 different Candida albicans isolates was subjected to multilocus sequence typing (MLST) in two laboratories to obtain sequence data for 10 published housekeeping gene fragments. Analysis of data for all possible combinations of five, six, seven, eight, and nine of the fragments showed that a set comprising the fragments AAT1a, ACC1, ADP1, MPIb, SYA1, VPS13, and ZWF1b was the smallest that yielded 86 unique diploid sequence types for the 86 isolates. This set is recommended for future MLST with C. albicans.

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Year:  2003        PMID： 14605179      PMCID： PMC262540          DOI： 10.1128/JCM.41.11.5265-5266.2003

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  5 in total

Review 1.  Multi-locus sequence typing: a tool for global epidemiology.

Authors:  Rachel Urwin; Martin C J Maiden
Journal:  Trends Microbiol       Date:  2003-10       Impact factor: 17.079

2.  Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.

Authors:  M Nei; T Gojobori
Journal:  Mol Biol Evol       Date:  1986-09       Impact factor: 16.240

3.  Usefulness of multilocus sequence typing for characterization of clinical isolates of Candida albicans.

Authors:  M-E Bougnoux; S Morand; C d'Enfert
Journal:  J Clin Microbiol       Date:  2002-04       Impact factor: 5.948

4.  Multilocus sequence typing system for group B streptococcus.

Authors:  Nicola Jones; John F Bohnsack; Shinji Takahashi; Karen A Oliver; Man-Suen Chan; Frank Kunst; Philippe Glaser; Christophe Rusniok; Derrick W M Crook; Rosalind M Harding; Naiel Bisharat; Brian G Spratt
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

5.  Optimization and validation of multilocus sequence typing for Candida albicans.

Authors:  Arianna Tavanti; Neil A R Gow; Sonia Senesi; Martin C J Maiden; Frank C Odds
Journal:  J Clin Microbiol       Date:  2003-08       Impact factor: 5.948
  5 in total
  77 in total

1.  Multilocus sequence typing for analyses of clonality of Candida albicans strains in Taiwan.

Authors:  Kuo-Wei Chen; Yee-Chun Chen; Hsiu-Jung Lo; Frank C Odds; Tzu-Hui Wang; Chi-Yang Lin; Shu-Ying Li
Journal:  J Clin Microbiol       Date:  2006-06       Impact factor: 5.948

Review 2.  Multilocus sequence typing: Data analysis in clinical microbiology and public health.

Authors:  Christopher B Sullivan; Matthew A Diggle; Stuart C Clarke
Journal:  Mol Biotechnol       Date:  2005-03       Impact factor: 2.695

3.  Four-year persistence of a single Candida albicans genotype causing bloodstream infections in a surgical ward proven by multilocus sequence typing.

Authors:  Maria Anna Viviani; Massimo Cogliati; Maria Carmela Esposto; Anna Prigitano; Anna Maria Tortorano
Journal:  J Clin Microbiol       Date:  2006-01       Impact factor: 5.948

4.  Molecular phylogenetics of Candida albicans.

Authors:  Frank C Odds; Marie-Elisabeth Bougnoux; Duncan J Shaw; Judith M Bain; Amanda D Davidson; Dorothée Diogo; Mette D Jacobsen; Maud Lecomte; Shu-Ying Li; Arianna Tavanti; Martin C J Maiden; Neil A R Gow; Christophe d'Enfert
Journal:  Eukaryot Cell       Date:  2007-04-06

5.  Molecular and Histological Association Between Candida albicans from Oral Soft Tissue and Carious Dentine of HIV-Positive Children.

Authors:  Elaine Blignaut; Willie F P van Heerden
Journal:  Mycopathologia       Date:  2015-07-08       Impact factor: 2.574

Review 6.  Multilocus sequence typing of pathogenic Candida species.

Authors:  Frank C Odds; Mette D Jacobsen
Journal:  Eukaryot Cell       Date:  2008-05-02

7.  Use of microsatellite markers and gene dosage to quantify gene copy numbers in Candida albicans.

Authors:  J-M Costa; O Eloy; F Botterel; G Janbon; S Bretagne
Journal:  J Clin Microbiol       Date:  2005-03       Impact factor: 5.948

8.  Impact of genetic background on allele selection in a highly mutable Candida albicans gene, PNG2.

Authors:  Ningxin Zhang; Richard D Cannon; Barbara R Holland; Mark L Patchett; Jan Schmid
Journal:  PLoS One       Date:  2010-03-09       Impact factor: 3.240

9.  Virulence attenuation of Candida albicans genetic variants isolated from a patient with a recurrent bloodstream infection.

Authors:  Paula Sampaio; Marlene Santos; Alexandra Correia; Fábio E Amaral; Julio Chavéz-Galarza; Sofia Costa-de-Oliveira; António G Castro; Jorge Pedrosa; Célia Pais
Journal:  PLoS One       Date:  2010-04-13       Impact factor: 3.240

10.  Molecular typing of Australian Scedosporium isolates showing genetic variability and numerous S. aurantiacum.

Authors:  Laurence Delhaes; Azian Harun; Sharon C A Chen; Quoc Nguyen; Monica Slavin; Christopher H Heath; Krystyna Maszewska; Catriona Halliday; Vincent Robert; Tania C Sorrell; Wieland Meyer
Journal:  Emerg Infect Dis       Date:  2008-02       Impact factor: 6.883
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