Literature DB >> 14602013

Factors affecting conformation in proline-containing peptides.

Carol M Taylor1, Renaud Hardré, Patrick J B Edwards, Jae H Park.   

Abstract

[reaction: see text] NMR was used to study the thermodynamics of the cis --> trans isomerization for prolyl amide bonds in the compounds shown. The magnitude of K(t/c) for C-terminal esters is greater than for the corresponding amides, signifying stronger backbone stereoelectronic effects in esters. Increasing the steric bulk of the N-terminal residue from Ac- to Ac-Gly- favors the trans conformation. Incorporation of a Phe residue N-terminal to Pro, however, shifts the equilibrium in favor of the cis conformation, via a stabilizing aromatic-proline interaction.

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Year:  2003        PMID: 14602013     DOI: 10.1021/ol035711r

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  8 in total

1.  Aromatic-proline interactions: electronically tunable CH/π interactions.

Authors:  Neal J Zondlo
Journal:  Acc Chem Res       Date:  2012-11-13       Impact factor: 22.384

2.  Requirements for Skp1 processing by cytosolic prolyl 4(trans)-hydroxylase and α-N-acetylglucosaminyltransferase enzymes involved in O₂ signaling in dictyostelium.

Authors:  Hanke van der Wel; Jennifer M Johnson; Yuechi Xu; Chamini V Karunaratne; Kyle D Wilson; Yusuf Vohra; Geert-Jan Boons; Carol M Taylor; Brad Bendiak; Christopher M West
Journal:  Biochemistry       Date:  2011-02-09       Impact factor: 3.162

3.  Molecular basis for proline- and arginine-rich peptide inhibition of proteasome.

Authors:  Asokan Anbanandam; Diana C Albarado; Daniela C Tirziu; Michael Simons; Sudha Veeraraghavan
Journal:  J Mol Biol       Date:  2008-09-16       Impact factor: 5.469

4.  Trans-cis switching mechanisms in proline analogues and their relevance for the gating of the 5-HT3 receptor.

Authors:  Claudio Melis; Giovanni Bussi; Sarah C R Lummis; Carla Molteni
Journal:  J Phys Chem B       Date:  2009-09-03       Impact factor: 2.991

5.  Proline editing: a general and practical approach to the synthesis of functionally and structurally diverse peptides. Analysis of steric versus stereoelectronic effects of 4-substituted prolines on conformation within peptides.

Authors:  Anil K Pandey; Devan Naduthambi; Krista M Thomas; Neal J Zondlo
Journal:  J Am Chem Soc       Date:  2013-03-11       Impact factor: 15.419

6.  Conformational changes associated with post-translational modifications of Pro(143) in Skp1 of Dictyostelium--a dipeptide model system.

Authors:  Chamini V Karunaratne; Thomas K Weldeghiorghis; Christopher M West; Carol M Taylor
Journal:  J Am Chem Soc       Date:  2014-10-16       Impact factor: 15.419

7.  n→π* interactions of amides and thioamides: implications for protein stability.

Authors:  Robert W Newberry; Brett VanVeller; Ilia A Guzei; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2013-05-20       Impact factor: 15.419

8.  Tunable control of polyproline helix (PPII) structure via aromatic electronic effects: an electronic switch of polyproline helix.

Authors:  Anil K Pandey; Krista M Thomas; Christina R Forbes; Neal J Zondlo
Journal:  Biochemistry       Date:  2014-08-08       Impact factor: 3.162

  8 in total

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