Literature DB >> 14595853

Entropy evaluation using the kinetic method: is it feasible?

László Drahos1, Károly Vékey.   

Abstract

The kinetic method is one of the most widely used experimental techniques for the measurement of thermochemical parameters by mass spectrometry. Recently it has been realized that it can also be used to determine reaction entropies, but the validity of this approach has not been established. This Perspective evaluates kinetic method plots in cases where there is a significant entropy difference between the competing fragmentation channels (i.e. between sample and reference compounds in the dissociating cluster ion). The concept underlying this study is to calculate mass spectra theoretically, based on known thermochemical parameters and as a function of experimental conditions. This can be done accurately using the RRKM-based MassKinetics software. The resulting mass spectra are then interpreted by the kinetic method, yielding DeltaH and DeltaS values. These values are, in turn, compared with the true values used to generate the calculated mass spectra. The results show that the reaction entropy difference between sample and reference has a very large influence on kinetic method plots. This should always be considered when studying energy-dependent mass spectra (using metastable ions or low- or high-energy collision-induced dissociation (CID)), even if only DeltaH is to be determined. Kinetic method plots are not strictly linear and this becomes a serious issue in the case of small molecules showing a large entropy effect. In such cases, results obtained at a low degree of excitation are more accurate. Energy and entropy effects can be evaluated in a relatively straightforward manner: first, the apparent Gibbs energy (DeltaG(app)) and effective temperature (T(eff)) are determined from kinetic method plots (intercept and slope, respectively), obtained from experiments using various degrees of excitation. Second, the resulting DeltaG(app) is plotted against T(eff), the slope yielding DeltaS while the intercept (extrapolation to zero temperature) yields DeltaH. This data evaluation yields more accurate results than alternative methods used in the literature. The resulting DeltaH values are fairly accurate, with errors, in most cases, <4 kJ mol(-1). On the other hand, DeltaS is systematically underestimated by 20-40%. Empirically scaling DeltaS values determined by the kinetic method by 1.35 results in a DeltaS value within 20% (or 10 J mol(-1) K(-1)) of the theoretical value. Copyright 2003 John Wiley & Sons, Ltd.

Year:  2003        PMID: 14595853     DOI: 10.1002/jms.538

Source DB:  PubMed          Journal:  J Mass Spectrom        ISSN: 1076-5174            Impact factor:   1.982


  10 in total

1.  A comprehensive evaluation of the kinetic method applied in the determination of the proton affinity of the nucleic acid molecules.

Authors:  Leonardo Di Donna; Anna Napoli; Giovanni Sindona; Costantinos Athanassopoulos
Journal:  J Am Soc Mass Spectrom       Date:  2004-07       Impact factor: 3.109

2.  SORI excitation: collisional and radiative processes.

Authors:  Csaba Peltz; László Drahos; Károly Vékey
Journal:  J Am Soc Mass Spectrom       Date:  2007-09-20       Impact factor: 3.109

3.  Delta(DeltaS) and Delta(DeltaS) for the competing bond cleavage reactions in (CH3CN)(ROH)H+ [R = CH3, C2H5, C3H7, (CH3)2CH].

Authors:  Julie A D Grabowy; Paul M Mayer
Journal:  J Am Soc Mass Spectrom       Date:  2005-10-28       Impact factor: 3.109

4.  Electronic effects of 11β substituted 17β-estradiol derivatives and instrumental effects on the relative gas phase acidity.

Authors:  Sandrine Bourgoin-Voillard; Françoise Fournier; Carlos Afonso; Emilie-Laure Zins; Yves Jacquot; Claude Pèpe; Guy Leclercq; Jean-Claude Tabet
Journal:  J Am Soc Mass Spectrom       Date:  2012-10-02       Impact factor: 3.109

5.  Proton affinity of beta-oxalylaminoalanine (BOAA): incorporation of direct entropy correction into the single-reference kinetic method.

Authors:  Joshua J Wind; Lindsay Papp; Maria Happel; Karen Hahn; Erica J Andriole; John C Poutsma
Journal:  J Am Soc Mass Spectrom       Date:  2005-07       Impact factor: 3.109

6.  A comparison of the gas phase acidities of phospholipid headgroups: experimental and computational studies.

Authors:  Michael C Thomas; Todd W Mitchell; Stephen J Blanksby
Journal:  J Am Soc Mass Spectrom       Date:  2005-04-26       Impact factor: 3.109

7.  The sodium ion affinities of simple di-, tri-, and tetrapeptides.

Authors:  Ping Wang; Chrys Wesdemiotis; Catherine Kapota; Gilles Ohanessian
Journal:  J Am Soc Mass Spectrom       Date:  2006-12-08       Impact factor: 3.109

8.  Critical evaluation of kinetic method measurements: possible origins of nonlinear effects.

Authors:  Sandrine Bourgoin-Voillard; Carlos Afonso; Denis Lesage; Emilie-Laure Zins; Jean-Claude Tabet; P B Armentrout
Journal:  J Am Soc Mass Spectrom       Date:  2013-02-07       Impact factor: 3.109

9.  Estimation of gas-phase acidities of deoxyribonucleosides: an experimental and theoretical study.

Authors:  Sangeeta Kumari; Chebrolu Lavanya Devi; Sripadi Prabhakar; Kotamarthi Bhanuprakash; Mariappanadar Vairamani
Journal:  J Am Soc Mass Spectrom       Date:  2009-09-30       Impact factor: 3.109

10.  Stereochemical effects during [M-H]- dissociations of epimeric 11-OH-17beta-estradiols and distant electronic effects of substituents at C(11) position on gas phase acidity.

Authors:  Sandrine Bourgoin-Voillard; Emilie-Laure Zins; Françoise Fournier; Yves Jacquot; Carlos Afonso; Claude Pèpe; Guy Leclercq; Jean-Claude Tabet
Journal:  J Am Soc Mass Spectrom       Date:  2009-09-03       Impact factor: 3.109

  10 in total

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